RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 RAB40ALP0C0E4 278 aa11.4□□□□□ -0.59
SPIDR-209ENST00000519141 ABCD3P28288 659 aa11.4□□□□□ -0.59
SPIDR-209ENST00000519141 IL18R1Q13478 541 aa11.4□□□□□ -0.59
SPIDR-209ENST00000519141 PCOLCEQ15113 449 aa11.4□□□□□ -0.59
SPIDR-209ENST00000519141 KLHL26Q53HC5 615 aa11.4□□□□□ -0.59
SPIDR-209ENST00000519141 PODNL1Q6PEZ8 512 aa11.4□□□□□ -0.59
SPIDR-209ENST00000519141 ZNF550Q7Z398 422 aa11.4□□□□□ -0.59
SPIDR-209ENST00000519141 GDF7Q7Z4P5 450 aa11.4□□□□□ -0.59
SPIDR-209ENST00000519141 TOR1AIP2Q8NFQ8 470 aa11.4□□□□□ -0.59
SPIDR-209ENST00000519141 OR4K5Q8NGD3 323 aa11.4□□□□□ -0.59
SPIDR-209ENST00000519141 OR5L2Q8NGL0 311 aa11.4□□□□□ -0.59
SPIDR-209ENST00000519141 CT55Q8WUE5 264 aa11.4□□□□□ -0.59
SPIDR-209ENST00000519141 GTPBP3Q969Y2 492 aaKnown RBP11.4□□□□□ -0.59
SPIDR-209ENST00000519141 NIPSNAP1Q9BPW8 284 aa11.4□□□□□ -0.59
SPIDR-209ENST00000519141 FOXJ2Q9P0K8 574 aa11.4□□□□□ -0.59
SPIDR-209ENST00000519141 TSPAN2O60636 221 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 DKK1O94907 266 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 POU2F1P14859 743 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 TBXA2RP21731 343 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 HTR2AP28223 471 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 POLR2IP36954 125 aaKnown RBP11.39□□□□□ -0.59
SPIDR-209ENST00000519141 PNLIPRP2P54317 469 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 MYBPC1Q00872 1141 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 NPRL3Q12980 569 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 KEAP1Q14145 624 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 OR1Q1Q15612 314 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 PGBD2Q6P3X8 592 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 TIPARPQ7Z3E1 657 aaKnown RBP11.39□□□□□ -0.59
SPIDR-209ENST00000519141 ZNF440Q8IYI8 595 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 PARP8Q8N3A8 854 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 ESX1Q8N693 406 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 MUS81Q96NY9 551 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 SPRY4Q9C004 299 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 GRIP2Q9C0E4 1043 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 ZNF700Q9H0M5 742 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 TMEM27Q9HBJ8 222 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 FLRT3Q9NZU0 649 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 SCOCQ9UIL1 159 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 SLC7A7Q9UM01 511 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 HS3ST3B1Q9Y662 390 aa11.39□□□□□ -0.59
SPIDR-209ENST00000519141 IGHV1-45A0A0A0MS14 117 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 H3BNH8 94 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 ICOSLGO75144 302 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 ZFAND5O76080 213 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 GASTP01350 101 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 UBL4AP11441 157 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 COX6A1P12074 109 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 TCN2P20062 427 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 MMP11P24347 488 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 IFNGR2P38484 337 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 RPS6KA3P51812 740 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 EXT1Q16394 746 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 BTBD16Q32M84 506 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 ZNF613Q6PF04 617 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 TTC33Q6PID6 262 aaPredicted RBP11.38□□□□□ -0.59
SPIDR-209ENST00000519141 ZNF730Q6ZMV8 503 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 RRM2BQ7LG56 351 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 THAP5Q7Z6K1 395 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 AMER2Q8N7J2 671 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 SETD9Q8NE22 299 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 THAP3Q8WTV1 239 aaPredicted RBP11.38□□□□□ -0.59
SPIDR-209ENST00000519141 ACOT11Q8WXI4 607 aaPredicted RBP11.38□□□□□ -0.59
SPIDR-209ENST00000519141 CNTNAP3BQ96NU0 1288 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 DGCR6LQ9BY27 220 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 DEFB126Q9BYW3 111 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 CNTNAP3Q9BZ76 1288 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 UCK2Q9BZX2 261 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 TRIM2Q9C040 744 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 ING2Q9H160 280 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 LIN28AQ9H9Z2 209 aaKnown RBP11.38□□□□□ -0.59
SPIDR-209ENST00000519141 TCFL5Q9UL49 500 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 WASF3Q9UPY6 502 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 GMPPBQ9Y5P6 360 aa11.38□□□□□ -0.59
SPIDR-209ENST00000519141 A0A087WUU8 490 aa11.37□□□□□ -0.59
SPIDR-209ENST00000519141 OR6C70A6NIJ9 312 aa11.37□□□□□ -0.59
SPIDR-209ENST00000519141 TNFSF15O95150 251 aa11.37□□□□□ -0.59
SPIDR-209ENST00000519141 NGFRP08138 427 aa11.37□□□□□ -0.59
SPIDR-209ENST00000519141 ADH7P40394 386 aa11.37□□□□□ -0.59
SPIDR-209ENST00000519141 ACAA2P42765 397 aaKnown RBP11.37□□□□□ -0.59
SPIDR-209ENST00000519141 CLK3P49761 638 aaKnown RBP11.37□□□□□ -0.59
SPIDR-209ENST00000519141 RPS15P62841 145 aaKnown RBP11.37□□□□□ -0.59
SPIDR-209ENST00000519141 TARDBPQ13148 414 aaKnown RBP eCLIP11.37□□□□□ -0.59
SPIDR-209ENST00000519141 EFR3AQ14156 821 aa11.37□□□□□ -0.59
SPIDR-209ENST00000519141 NDUFAF6Q330K2 333 aa11.37□□□□□ -0.59
SPIDR-209ENST00000519141 FNDC7Q5VTL7 733 aa11.37□□□□□ -0.59
SPIDR-209ENST00000519141 ZNF691Q5VV52 312 aa11.37□□□□□ -0.59
SPIDR-209ENST00000519141 TMEM154Q6P9G4 183 aa11.37□□□□□ -0.59
SPIDR-209ENST00000519141 KLHL17Q6TDP4 642 aa11.37□□□□□ -0.59
SPIDR-209ENST00000519141 ISLR2Q6UXK2 745 aa11.37□□□□□ -0.59
SPIDR-209ENST00000519141 NKAIN4Q8IVV8 208 aa11.37□□□□□ -0.59
SPIDR-209ENST00000519141 ZNF786Q8N393 782 aa11.37□□□□□ -0.59
SPIDR-209ENST00000519141 GATSQ8NAP1 163 aa11.37□□□□□ -0.59
SPIDR-209ENST00000519141 FAM71CQ8NEG0 241 aa11.37□□□□□ -0.59
SPIDR-209ENST00000519141 PIGXQ8TBF5 258 aa11.37□□□□□ -0.59
SPIDR-209ENST00000519141 RNF217Q8TC41 542 aa11.37□□□□□ -0.59
SPIDR-209ENST00000519141 PHOSPHO1Q8TCT1 267 aa11.37□□□□□ -0.59
SPIDR-209ENST00000519141 PITX2Q99697 317 aa11.37□□□□□ -0.59
SPIDR-209ENST00000519141 APOL4Q9BPW4 351 aa11.37□□□□□ -0.59
SPIDR-209ENST00000519141 POLR1BQ9H9Y6 1135 aa11.37□□□□□ -0.59
SPIDR-209ENST00000519141 RPS6KB2Q9UBS0 482 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms