RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 CSRP3P50461 194 aa2.56□□□□□ -2
SKP1-204ENST00000517691 RAP1GDS1P52306 607 aa2.56□□□□□ -2
SKP1-204ENST00000517691 PLA2G16P53816 162 aa2.56□□□□□ -2
SKP1-204ENST00000517691 NAGLUP54802 743 aa2.56□□□□□ -2
SKP1-204ENST00000517691 FOXL2P58012 376 aa2.56□□□□□ -2
SKP1-204ENST00000517691 RAB8AP61006 207 aa2.56□□□□□ -2
SKP1-204ENST00000517691 STXBP1P61764 594 aaKnown RBP2.56□□□□□ -2
SKP1-204ENST00000517691 HERVK_113P63132 956 aa2.56□□□□□ -2
SKP1-204ENST00000517691 BTN3A2P78410 334 aa2.56□□□□□ -2
SKP1-204ENST00000517691 PHEXP78562 749 aa2.56□□□□□ -2
SKP1-204ENST00000517691 MAT1AQ00266 395 aaKnown RBP2.56□□□□□ -2
SKP1-204ENST00000517691 REEP5Q00765 189 aa2.56□□□□□ -2
SKP1-204ENST00000517691 SPIBQ01892 262 aa2.56□□□□□ -2
SKP1-204ENST00000517691 RELAQ04206 551 aa2.56□□□□□ -2
SKP1-204ENST00000517691 OCA2Q04671 838 aa2.56□□□□□ -2
SKP1-204ENST00000517691 RBPJQ06330 500 aa2.56□□□□□ -2
SKP1-204ENST00000517691 ACSM1Q08AH1 577 aa2.56□□□□□ -2
SKP1-204ENST00000517691 DNASE1L3Q13609 305 aa2.56□□□□□ -2
SKP1-204ENST00000517691 CASP8Q14790 479 aa2.56□□□□□ -2
SKP1-204ENST00000517691 HERC3Q15034 1050 aa2.56□□□□□ -2
SKP1-204ENST00000517691 SNAPC1Q16533 368 aa2.56□□□□□ -2
SKP1-204ENST00000517691 PRTGQ2VWP7 1150 aa2.56□□□□□ -2
SKP1-204ENST00000517691 DEFB109BQ30KR1 87 aa2.56□□□□□ -2
SKP1-204ENST00000517691 DEFB134Q4QY38 66 aa2.56□□□□□ -2
SKP1-204ENST00000517691 LRRC23Q53EV4 343 aaPredicted RBP2.56□□□□□ -2
SKP1-204ENST00000517691 ZNF678Q5SXM1 525 aa2.56□□□□□ -2
SKP1-204ENST00000517691 BEND6Q5SZJ8 279 aaPredicted RBP2.56□□□□□ -2
SKP1-204ENST00000517691 SPATA46Q5T0L3 261 aa2.56□□□□□ -2
SKP1-204ENST00000517691 ATP1A1-AS1Q5TC04 95 aa2.56□□□□□ -2
SKP1-204ENST00000517691 LIPJQ5W064 366 aa2.56□□□□□ -2
SKP1-204ENST00000517691 GRHL2Q6ISB3 625 aa2.56□□□□□ -2
SKP1-204ENST00000517691 MED27Q6P2C8 311 aa2.56□□□□□ -2
SKP1-204ENST00000517691 PRMT9Q6P2P2 845 aa2.56□□□□□ -2
SKP1-204ENST00000517691 PODNL1Q6PEZ8 512 aa2.56□□□□□ -2
SKP1-204ENST00000517691 CORO6Q6QEF8 472 aa2.56□□□□□ -2
SKP1-204ENST00000517691 METAP1DQ6UB28 335 aaPredicted RBP2.56□□□□□ -2
SKP1-204ENST00000517691 C16orf89Q6UX73 402 aa2.56□□□□□ -2
SKP1-204ENST00000517691 ABHD13Q7L211 337 aa2.56□□□□□ -2
SKP1-204ENST00000517691 PRSS41Q7RTY9 318 aa2.56□□□□□ -2
SKP1-204ENST00000517691 VN1R4Q7Z5H5 301 aa2.56□□□□□ -2
SKP1-204ENST00000517691 PPP1R32Q7Z5V6 425 aa2.56□□□□□ -2
SKP1-204ENST00000517691 CROCCP2Q86T23 111 aa2.56□□□□□ -2
SKP1-204ENST00000517691 PDSS2Q86YH6 399 aa2.56□□□□□ -2
SKP1-204ENST00000517691 KLHDC8AQ8IYD2 350 aa2.56□□□□□ -2
SKP1-204ENST00000517691 DSELQ8IZU8 1212 aa2.56□□□□□ -2
SKP1-204ENST00000517691 IQCKQ8N0W5 287 aa2.56□□□□□ -2
SKP1-204ENST00000517691 TTLQ8NG68 377 aa2.56□□□□□ -2
SKP1-204ENST00000517691 OR4K1Q8NGD4 311 aa2.56□□□□□ -2
SKP1-204ENST00000517691 OR9A4Q8NGU2 314 aa2.56□□□□□ -2
SKP1-204ENST00000517691 MBD3L2Q8NHZ7 208 aaPredicted RBP2.56□□□□□ -2
SKP1-204ENST00000517691 PROKR1Q8TCW9 393 aa2.56□□□□□ -2
SKP1-204ENST00000517691 TCP10LQ8TDR4 215 aa2.56□□□□□ -2
SKP1-204ENST00000517691 UBTD2Q8WUN7 234 aa2.56□□□□□ -2
SKP1-204ENST00000517691 RAB40AQ8WXH6 277 aa2.56□□□□□ -2
SKP1-204ENST00000517691 STARD8Q92502 1023 aa2.56□□□□□ -2
SKP1-204ENST00000517691 SLC9A6Q92581 669 aa2.56□□□□□ -2
SKP1-204ENST00000517691 NPIPB3Q92617 1050 aa2.56□□□□□ -2
SKP1-204ENST00000517691 GCDHQ92947 438 aaPredicted RBP2.56□□□□□ -2
SKP1-204ENST00000517691 NCLNQ969V3 563 aa2.56□□□□□ -2
SKP1-204ENST00000517691 SLC7A6OSQ96CW6 309 aaPredicted RBP2.56□□□□□ -2
SKP1-204ENST00000517691 REPS1Q96D71 796 aa2.56□□□□□ -2
SKP1-204ENST00000517691 TM4SF19Q96DZ7 209 aa2.56□□□□□ -2
SKP1-204ENST00000517691 CCDC126Q96EE4 140 aa2.56□□□□□ -2
SKP1-204ENST00000517691 BSCL2Q96G97 398 aaPredicted RBP2.56□□□□□ -2
SKP1-204ENST00000517691 NSMCE2Q96MF7 247 aa2.56□□□□□ -2
SKP1-204ENST00000517691 LRFN5Q96NI6 719 aa2.56□□□□□ -2
SKP1-204ENST00000517691 CATSPER2Q96P56 530 aa2.56□□□□□ -2
SKP1-204ENST00000517691 F2RL3Q96RI0 385 aa2.56□□□□□ -2
SKP1-204ENST00000517691 TRIB1Q96RU8 372 aa2.56□□□□□ -2
SKP1-204ENST00000517691 GPHA2Q96T91 129 aa2.56□□□□□ -2
SKP1-204ENST00000517691 MTERF1Q99551 399 aaKnown RBP2.56□□□□□ -2
SKP1-204ENST00000517691 ZBTB18Q99592 522 aa2.56□□□□□ -2
SKP1-204ENST00000517691 C17orf62Q9BQA9 187 aa2.56□□□□□ -2
SKP1-204ENST00000517691 ABHD6Q9BV23 337 aa2.56□□□□□ -2
SKP1-204ENST00000517691 TMEM109Q9BVC6 243 aa2.56□□□□□ -2
SKP1-204ENST00000517691 ERVK-6Q9BXR3 956 aa2.56□□□□□ -2
SKP1-204ENST00000517691 GPR87Q9BY21 358 aa2.56□□□□□ -2
SKP1-204ENST00000517691 SHCBP1LQ9BZQ2 653 aa2.56□□□□□ -2
SKP1-204ENST00000517691 SPNS1Q9H2V7 528 aa2.56□□□□□ -2
SKP1-204ENST00000517691 RHBGQ9H310 441 aa2.56□□□□□ -2
SKP1-204ENST00000517691 VCX2Q9H322 139 aa2.56□□□□□ -2
SKP1-204ENST00000517691 KLHL31Q9H511 634 aa2.56□□□□□ -2
SKP1-204ENST00000517691 ACTL8Q9H568 366 aa2.56□□□□□ -2
SKP1-204ENST00000517691 JKAMPQ9P055 326 aa2.56□□□□□ -2
SKP1-204ENST00000517691 ABI3Q9P2A4 366 aa2.56□□□□□ -2
SKP1-204ENST00000517691 SLC17A7Q9P2U7 560 aa2.56□□□□□ -2
SKP1-204ENST00000517691 ZNF282Q9UDV7 671 aaPredicted RBP2.56□□□□□ -2
SKP1-204ENST00000517691 IL17BQ9UHF5 180 aa2.56□□□□□ -2
SKP1-204ENST00000517691 LGALS13Q9UHV8 139 aa2.56□□□□□ -2
SKP1-204ENST00000517691 PCTPQ9UKL6 214 aa2.56□□□□□ -2
SKP1-204ENST00000517691 EMCNQ9ULC0 261 aa2.56□□□□□ -2
SKP1-204ENST00000517691 ZNF490Q9ULM2 529 aaPredicted RBP2.56□□□□□ -2
SKP1-204ENST00000517691 PADI2Q9Y2J8 665 aa2.56□□□□□ -2
SKP1-204ENST00000517691 PLLPQ9Y342 182 aa2.56□□□□□ -2
SKP1-204ENST00000517691 MRPS2Q9Y399 296 aaKnown RBP2.56□□□□□ -2
SKP1-204ENST00000517691 RNF11Q9Y3C5 154 aa2.56□□□□□ -2
SKP1-204ENST00000517691 COMMD3-BMI1R4GMX3 469 aa2.56□□□□□ -2
SKP1-204ENST00000517691 PMF1-BGLAPU3KQ54 211 aa2.56□□□□□ -2
SKP1-204ENST00000517691 LAMA5O15230 3695 aa2.56□□□□□ -2
SKP1-204ENST00000517691 RP1P56715 2156 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms