RNA–Protein interactions for RNA: ENST00000516258.1

RNU4-71P-201, Transcript of RNA, U4 small nuclear 71, pseudogene, humanhuman

BASIC

Gene RNU4-71P, Length 113 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-71P-201ENST00000516258 TLR4O00206 839 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 CDRT1O95170 752 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 POLR2MP0CAP2 368 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 TLX1NBP0CAT3 122 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 CHTF8P0CG12 524 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 PNMA6AP0CW24 399 aaPredicted RBP0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 RBMY1A1P0DJD3 496 aaKnown RBP0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 RBMY1CP0DJD4 496 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 ALPPL2P10696 532 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 AKR1B1P15121 316 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 RND3P61587 244 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 BAMBIQ13145 260 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 SIM2Q14190 667 aaPredicted RBP0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 RBMY1FQ15415 496 aaKnown RBP0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 ZNF699Q32M78 642 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 HCP5Q6MZN7 132 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 C1orf94Q6P1W5 598 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 CD164L2Q6UWJ8 174 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 STAC2Q6ZMT1 411 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 PRSS41Q7RTY9 318 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 SELENOMQ8WWX9 145 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 SLF1Q9BQI6 1058 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 SRXN1Q9BYN0 137 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 LHX5Q9H2C1 402 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 FAM114A2Q9NRY5 505 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 DCAF13Q9NV06 445 aaKnown RBP0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 SLC25A37Q9NYZ2 338 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 SWAP70Q9UH65 585 aa0.12□□□□□ -2.39
RNU4-71P-201ENST00000516258 LOC100131303A0A0U1RQF7 123 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 TM9SF1O15321 606 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 CFLARO15519 480 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 GLCEO94923 617 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 SIX3O95343 332 aaPredicted RBP0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 JCHAINP01591 159 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 ADRA2AP08913 450 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 PGAM1P18669 254 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 RFC2P35250 354 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 CXCL5P42830 114 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 GRB7Q14451 532 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 CDKN3Q16667 212 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 LRRC38Q5VT99 294 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 C19orf35Q6ZS72 473 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 CCDC186Q7Z3E2 898 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 RANBP3LQ86VV4 465 aaPredicted RBP0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 MFSD6LQ8IWD5 586 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 PGAM4Q8N0Y7 254 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 BPIFB2Q8N4F0 458 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 NKAPP1Q8N9T2 125 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 CNDP2Q96KP4 475 aaKnown RBP0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 STACQ99469 402 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 ZNF416Q9BWM5 594 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 OR11A1Q9GZK7 315 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 NRBP1Q9UHY1 535 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 ZNF222Q9UK12 451 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 GRIN2DO15399 1336 aa0.11□□□□□ -2.39
RNU4-71P-201ENST00000516258 SCN1AP35498 2009 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 LAMB2P55268 1798 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 IGLV11-55A0A075B6I3 123 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 SLC30A4O14863 429 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 CD5LO43866 347 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 LINC00869P0C866 280 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 CPA3P15088 417 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 STIP1P31948 543 aaKnown RBP0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 SOAT1P35610 550 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 RPL4P36578 427 aaKnown RBP0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 TGFBR1P36897 503 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 RAD23AP54725 363 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 EWSR1Q01844 656 aaKnown RBP eCLIP0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 NRF1Q16656 503 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 TMEM52BQ4KMG9 183 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 FBXW9Q5XUX1 488 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 CAMK2N1Q7Z7J9 78 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 NAA40Q86UY6 237 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 TMEM126BQ8IUX1 230 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 EXOC8Q8IYI6 725 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 IL1F10Q8WWZ1 152 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 RGP1Q92546 391 aaPredicted RBP0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 EPSTI1Q96J88 318 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 PANX3Q96QZ0 392 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 DDX50Q9BQ39 737 aaKnown RBP0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 TEKT3Q9BXF9 490 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 CALHM2Q9HA72 323 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 PAK1IP1Q9NWT1 392 aaPredicted RBP0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 VPS54Q9P1Q0 977 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 S4R3C0 116 aa0.1□□□□□ -2.39
RNU4-71P-201ENST00000516258 A0A0G2JRQ6 117 aa0.09□□□□□ -2.4
RNU4-71P-201ENST00000516258 ESYT2A0FGR8 921 aa0.09□□□□□ -2.4
RNU4-71P-201ENST00000516258 H3BMH7 237 aa0.09□□□□□ -2.4
RNU4-71P-201ENST00000516258 CREB3O43889 395 aa0.09□□□□□ -2.4
RNU4-71P-201ENST00000516258 SRP72O76094 671 aaKnown RBP0.09□□□□□ -2.4
RNU4-71P-201ENST00000516258 GAS8O95995 478 aa0.09□□□□□ -2.4
RNU4-71P-201ENST00000516258 GSTA1P08263 222 aa0.09□□□□□ -2.4
RNU4-71P-201ENST00000516258 PRB4P10163 310 aaPredicted RBP0.09□□□□□ -2.4
RNU4-71P-201ENST00000516258 PAX3P23760 479 aa0.09□□□□□ -2.4
RNU4-71P-201ENST00000516258 FCARP24071 287 aa0.09□□□□□ -2.4
RNU4-71P-201ENST00000516258 CTNNA1P35221 906 aaKnown RBP0.09□□□□□ -2.4
RNU4-71P-201ENST00000516258 NPY2RP49146 381 aa0.09□□□□□ -2.4
RNU4-71P-201ENST00000516258 RPL8P62917 257 aaKnown RBP0.09□□□□□ -2.4
RNU4-71P-201ENST00000516258 SPIBQ01892 262 aa0.09□□□□□ -2.4
RNU4-71P-201ENST00000516258 WASHC5Q12768 1159 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms