RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	SRXN1	Q9BYN0	137 aa		13.98	□□□□□ -0.17
LMNA-223	ENST00000515459	UBQLN4	Q9NRR5	601 aa		13.98	□□□□□ -0.17
LMNA-223	ENST00000515459	B3GALT5	Q9Y2C3	310 aa		13.98	□□□□□ -0.17
LMNA-223	ENST00000515459	CAD	P27708	2225 aa		13.98	□□□□□ -0.17
LMNA-223	ENST00000515459	YLPM1	P49750	1951 aa	Known RBP	13.97	□□□□□ -0.17
LMNA-223	ENST00000515459	IGHV4-30-2	A0A087WSY4	118 aa		13.97	□□□□□ -0.17
LMNA-223	ENST00000515459	FAM234B	A2RU67	622 aa		13.97	□□□□□ -0.17
LMNA-223	ENST00000515459	GJE1	A6NN92	205 aa		13.97	□□□□□ -0.17
LMNA-223	ENST00000515459	SCD	O00767	359 aa		13.97	□□□□□ -0.17
LMNA-223	ENST00000515459	RAMP1	O60894	148 aa		13.97	□□□□□ -0.17
LMNA-223	ENST00000515459	KCNK2	O95069	426 aa		13.97	□□□□□ -0.17
LMNA-223	ENST00000515459	YES1	P07947	543 aa		13.97	□□□□□ -0.17
LMNA-223	ENST00000515459	PYGB	P11216	843 aa		13.97	□□□□□ -0.17
LMNA-223	ENST00000515459	LCN1	P31025	176 aa		13.97	□□□□□ -0.17
LMNA-223	ENST00000515459	NUDT6	P53370	316 aa		13.97	□□□□□ -0.17
LMNA-223	ENST00000515459	PRKAG1	P54619	331 aa		13.97	□□□□□ -0.17
LMNA-223	ENST00000515459	PRKAA2	P54646	552 aa		13.97	□□□□□ -0.17
LMNA-223	ENST00000515459	C21orf58	P58505	322 aa		13.97	□□□□□ -0.17
LMNA-223	ENST00000515459	TMEM249	Q2WGJ8	235 aa		13.97	□□□□□ -0.17
LMNA-223	ENST00000515459	AGAP6	Q5VW22	663 aa		13.97	□□□□□ -0.17
LMNA-223	ENST00000515459	FAM110B	Q8TC76	370 aa		13.97	□□□□□ -0.17
LMNA-223	ENST00000515459	TNFRSF13C	Q96RJ3	184 aa		13.97	□□□□□ -0.17
LMNA-223	ENST00000515459	IQCG	Q9H095	443 aa	Known RBP	13.97	□□□□□ -0.17
LMNA-223	ENST00000515459	TSPYL1	Q9H0U9	437 aa		13.97	□□□□□ -0.17
LMNA-223	ENST00000515459	L2HGDH	Q9H9P8	463 aa		13.97	□□□□□ -0.17
LMNA-223	ENST00000515459	MID1IP1	Q9NPA3	183 aa		13.97	□□□□□ -0.17
LMNA-223	ENST00000515459	TMEM160	Q9NX00	188 aa		13.97	□□□□□ -0.17
LMNA-223	ENST00000515459		A0A096LNT2	108 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459		A0A1W2PQD3	144 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	SHISA9	B4DS77	424 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	ZNF814	B7Z6K7	855 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	PDPK1	O15530	556 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	ACP2	P11117	423 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	CASQ1	P31415	396 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	SERPINB4	P48594	390 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	CDH11	P55287	796 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	FOXA1	P55317	472 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	DSCR9	P59020	149 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	FOXF1	Q12946	379 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	PPA1	Q15181	289 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	CD226	Q15762	336 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	STK11	Q15831	433 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	NOXRED1	Q6NXP6	359 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	CLEC2A	Q6UVW9	174 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459		Q6ZT83	130 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	SSX8	Q7RTT4	187 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	SZRD1	Q7Z422	152 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	ZAR1	Q86SH2	424 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	LCA5	Q86VQ0	697 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	SLC43A2	Q8N370	569 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	SLC16A11	Q8NCK7	471 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	NUP43	Q8NFH3	380 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	OR10H5	Q8NGA6	315 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	ZFP28	Q8NHY6	868 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	FBXO30	Q8TB52	745 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	MUCL1	Q96DR8	90 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	ADAD1	Q96M93	576 aa	Known RBP	13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	MS4A4E	Q96PG1	132 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	KCNK17	Q96T54	332 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	KLHDC3	Q9BQ90	382 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	BEX2	Q9BXY8	128 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	PYCARD	Q9ULZ3	195 aa		13.96	□□□□□ -0.17
LMNA-223	ENST00000515459	NBEAL1	Q6ZS30	2694 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	ZNF195	O14628	629 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	EFNA2	O43921	213 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	LYZL6	O75951	148 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	RSL1D1	O76021	490 aa	Known RBP	13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	HSPA4L	O95757	839 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	PTN	P21246	168 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	OR3A2	P47893	321 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	PRIM2	P49643	509 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	VLDLR	P98155	873 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	LOXL1	Q08397	574 aa	Predicted RBP	13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	DUSP5	Q16690	384 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	KRTAP24-1	Q3LI83	254 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	TMEM176B	Q3YBM2	270 aa	Predicted RBP	13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	TRIM46	Q7Z4K8	759 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	COX18	Q8N8Q8	333 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	FBXO27	Q8NI29	283 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	GIMAP5	Q96F15	307 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	RADIL	Q96JH8	1075 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	EGLN2	Q96KS0	407 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	AMBRA1	Q9C0C7	1298 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	GSTO2	Q9H4Y5	243 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	BCO1	Q9HAY6	547 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	NTM	Q9P121	344 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459	LPAR3	Q9UBY5	353 aa		13.95	□□□□□ -0.18
LMNA-223	ENST00000515459		A0A087WUV0	522 aa	Predicted RBP	13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	KIF2A	O00139	706 aa	Predicted RBP	13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	UBFD1	O14562	309 aa	Known RBP	13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	ABCD4	O14678	606 aa		13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	NUDT14	O95848	222 aa		13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	ALOX5	P09917	674 aa		13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	ENPP1	P22413	925 aa		13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	CASP9	P55211	416 aa		13.94	□□□□□ -0.18
LMNA-223	ENST00000515459	IRX1	P78414	480 aa	Predicted RBP	13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms