RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 METTL25Q8N6Q8 603 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 GATSQ8NAP1 163 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 PHOSPHO1Q8TCT1 267 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 PMM1Q92871 262 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 SIKE1Q9BRV8 207 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 SFXN3Q9BWM7 321 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 UCK2Q9BZX2 261 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 NPDC1Q9NQX5 325 aaPredicted RBP11.54□□□□□ -0.56
CLCN3-210ENST00000515420 MED17Q9NVC6 651 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 FOXD3Q9UJU5 478 aaPredicted RBP11.54□□□□□ -0.56
CLCN3-210ENST00000515420 ICAM5Q9UMF0 924 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 LIPT1Q9Y234 373 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 ZNF337Q9Y3M9 751 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 ZNF175Q9Y473 711 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 HEATR5AQ86XA9 2040 aa11.53□□□□□ -0.56
CLCN3-210ENST00000515420 KDM4EB2RXH2 506 aaPredicted RBP11.53□□□□□ -0.56
CLCN3-210ENST00000515420 C9JVG2 144 aa11.53□□□□□ -0.56
CLCN3-210ENST00000515420 HMGN4O00479 90 aa11.53□□□□□ -0.56
CLCN3-210ENST00000515420 KRT75O95678 551 aa11.53□□□□□ -0.56
CLCN3-210ENST00000515420 OR12D1P0DN82 309 aa11.53□□□□□ -0.56
CLCN3-210ENST00000515420 PSMA4P25789 261 aaKnown RBP11.53□□□□□ -0.56
CLCN3-210ENST00000515420 IDH3AP50213 366 aa11.53□□□□□ -0.56
CLCN3-210ENST00000515420 ASCL1P50553 236 aa11.53□□□□□ -0.56
CLCN3-210ENST00000515420 RPS3AP61247 264 aaKnown RBP11.53□□□□□ -0.56
CLCN3-210ENST00000515420 HPCAP84074 193 aa11.53□□□□□ -0.56
CLCN3-210ENST00000515420 TNFAIP8L2Q6P589 184 aaPredicted RBP11.53□□□□□ -0.56
CLCN3-210ENST00000515420 MEX3BQ6ZN04 569 aaKnown RBP11.53□□□□□ -0.56
CLCN3-210ENST00000515420 ZNF621Q6ZSS3 439 aa11.53□□□□□ -0.56
CLCN3-210ENST00000515420 GRAMD2AQ8IUY3 354 aa11.53□□□□□ -0.56
CLCN3-210ENST00000515420 LIX1LQ8IVB5 337 aa11.53□□□□□ -0.56
CLCN3-210ENST00000515420 MCEMP1Q8IX19 187 aa11.53□□□□□ -0.56
CLCN3-210ENST00000515420 DMRTC2Q8IXT2 367 aaPredicted RBP11.53□□□□□ -0.56
CLCN3-210ENST00000515420 C9orf106Q8NAJ2 232 aa11.53□□□□□ -0.56
CLCN3-210ENST00000515420 RELL2Q8NC24 303 aaPredicted RBP11.53□□□□□ -0.56
CLCN3-210ENST00000515420 XAGE5Q8WWM1 108 aa11.53□□□□□ -0.56
CLCN3-210ENST00000515420 ARSGQ96EG1 525 aa11.53□□□□□ -0.56
CLCN3-210ENST00000515420 C14orf79Q96F83 325 aa11.53□□□□□ -0.56
CLCN3-210ENST00000515420 ITCHQ96J02 903 aa11.53□□□□□ -0.56
CLCN3-210ENST00000515420 MARK4Q96L34 752 aa11.53□□□□□ -0.56
CLCN3-210ENST00000515420 TRNT1Q96Q11 434 aaKnown RBP11.53□□□□□ -0.56
CLCN3-210ENST00000515420 INPP5KQ9BT40 448 aa11.53□□□□□ -0.56
CLCN3-210ENST00000515420 TRIM8Q9BZR9 551 aa11.53□□□□□ -0.56
CLCN3-210ENST00000515420 PAQR5Q9NXK6 330 aaPredicted RBP11.53□□□□□ -0.56
CLCN3-210ENST00000515420 VDAC3Q9Y277 283 aa11.53□□□□□ -0.56
CLCN3-210ENST00000515420 WDR45Q9Y484 360 aa11.53□□□□□ -0.56
CLCN3-210ENST00000515420 GPC6Q9Y625 555 aaPredicted RBP11.53□□□□□ -0.56
CLCN3-210ENST00000515420 NPIPA5A0A0B4J1W7 369 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 SERINC4A6NH21 518 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 NPIPA7E9PJI5 369 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 H3BML4 177 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 GTPBP1O00178 669 aaKnown RBP11.52□□□□□ -0.57
CLCN3-210ENST00000515420 ETV2O00321 342 aaPredicted RBP11.52□□□□□ -0.57
CLCN3-210ENST00000515420 ZNF264O43296 627 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 FCMRO60667 390 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 DNAJA2O60884 412 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 UGT2B17O75795 530 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 LINGO3P0C6S8 592 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 NPIPA8P0DM63 369 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 TMIGD3P0DMS9 266 aaPredicted RBP11.52□□□□□ -0.57
CLCN3-210ENST00000515420 UBL4AP11441 157 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 FCGR2AP12318 317 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 BMP5P22003 454 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 TCEA1P23193 301 aaKnown RBP11.52□□□□□ -0.57
CLCN3-210ENST00000515420 ME2P23368 584 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 SSTR2P30874 369 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 CDKN2CP42773 168 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 ATP4BP51164 291 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 AQP5P55064 265 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 CLDN15P56746 228 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 RAC1P63000 192 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 FUT5Q11128 374 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 GPR68Q15743 365 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 PDZK1Q5T2W1 519 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 OR2A2Q6IF42 318 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 TYW3Q6IPR3 259 aaKnown RBP11.52□□□□□ -0.57
CLCN3-210ENST00000515420 FRRS1Q6ZNA5 592 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 RNF130Q86XS8 419 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 ZNF619Q8N2I2 560 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 ZNF614Q8N883 585 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 FAM71CQ8NEG0 241 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 OR9I1Q8NGQ6 314 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 OR5W2Q8NH69 310 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 ZFP90Q8TF47 636 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 ROPN1LQ96C74 230 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 SH3YL1Q96HL8 342 aaPredicted RBP11.52□□□□□ -0.57
CLCN3-210ENST00000515420 EBF4Q9BQW3 602 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 THUMPD1Q9NXG2 353 aaKnown RBP11.52□□□□□ -0.57
CLCN3-210ENST00000515420 JKAMPQ9P055 326 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 SLC35A3Q9Y2D2 325 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 L3MBTL1Q9Y468 752 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 DCHS2Q6V1P9 2916 aa11.52□□□□□ -0.57
CLCN3-210ENST00000515420 SLC22A20A6NK97 555 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 SYT5O00445 386 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 EDF1O60869 148 aaKnown RBP11.51□□□□□ -0.57
CLCN3-210ENST00000515420 ANP32DO95626 131 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 SUCLG1P53597 346 aaKnown RBP11.51□□□□□ -0.57
CLCN3-210ENST00000515420 SKP2Q13309 424 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 CBFBQ13951 182 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 FGFBP1Q14512 234 aa11.51□□□□□ -0.57
CLCN3-210ENST00000515420 TIGD2Q4W5G0 525 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms