RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 CYB5R3P00387 301 aaPredicted RBP7□□□□□ -1.29
PDLIM5-219ENST00000514743 IL1AP01583 271 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 HEXAP06865 529 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 FGF2P09038 288 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 CCL5P13501 91 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 EFNA1P20827 205 aaPredicted RBP7□□□□□ -1.29
PDLIM5-219ENST00000514743 GPR4P46093 362 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 VEGFBP49765 207 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 PKIAP61925 76 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 IMPG1Q17R60 797 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 MPEG1Q2M385 716 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 LRRC73Q5JTD7 316 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 RBM48Q5RL73 367 aaKnown RBP7□□□□□ -1.29
PDLIM5-219ENST00000514743 HACD4Q5VWC8 232 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 PRAMEF9Q5VWM5 478 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 ZNF548Q8NEK5 533 aaPredicted RBP7□□□□□ -1.29
PDLIM5-219ENST00000514743 OR10Q1Q8NGQ4 319 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 RNASE8Q8TDE3 154 aaKnown RBP7□□□□□ -1.29
PDLIM5-219ENST00000514743 ASB15Q8WXK1 588 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 OTULINQ96BN8 352 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 LGALS12Q96DT0 336 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 C11orf16Q9NQ32 467 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 LHX9Q9NQ69 397 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 CTPS2Q9NRF8 586 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 OBP2AQ9NY56 170 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 TAS2R3Q9NYW6 316 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 MAGEL2Q9UJ55 1249 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 ZNF490Q9ULM2 529 aaPredicted RBP7□□□□□ -1.29
PDLIM5-219ENST00000514743 ATG2AQ2TAZ0 1938 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 DENND4AQ7Z401 1863 aa7□□□□□ -1.29
PDLIM5-219ENST00000514743 FAM170BA6NMN3 283 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 EFCAB9A8MZ26 197 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 RGS14O43566 566 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 AHSA1O95433 338 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 CYC1P08574 325 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 AZGP1P25311 298 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 AOAHP28039 575 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 PSMB9P28065 219 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 SLC6A12P48065 614 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 TGM4P49221 684 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 RRAS2P62070 204 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 ADARB1P78563 741 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 FAM174BQ3ZCQ3 159 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 ACTBL2Q562R1 376 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 CCDC157Q569K6 752 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 SPANXN4Q5MJ08 99 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 KLHL24Q6TFL4 600 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 PLET1Q6UQ28 207 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 IL20RBQ6UXL0 311 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 ABHD13Q7L211 337 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 HS3ST5Q8IZT8 346 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 GPR137CQ8N3F9 429 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 CHST14Q8NCH0 376 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 OR14A16Q8NHC5 309 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 ZNF596Q8TC21 504 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 MRPS31Q92665 395 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 HHIPQ96QV1 700 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 ZNF300Q96RE9 604 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 MRI1Q9BV20 369 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 SRA1Q9HD15 236 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 SERHLQ9NQF3 203 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 SMPD3Q9NY59 655 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 CLEC2DQ9UHP7 191 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 SCP2D1Q9UJQ7 156 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 UTS2RQ9UKP6 389 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 MRPS18CQ9Y3D5 142 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 ABHD14A-ACY1A0A1B0GW23 586 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 OR6C68A6NDL8 312 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 M0R233 179 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 KCNAB3O43448 404 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 ICOSLGO75144 302 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 RPP14O95059 124 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 C6orf47O95873 294 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 B3GALT4O96024 378 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 LALBAP00709 142 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 PDYNP01213 254 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 IFNA6P05013 189 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 SNRPCP09234 159 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 CTSAP10619 480 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 IL7RP16871 459 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 PTPN6P29350 595 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 HOXA9P31269 272 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 RPS19P39019 145 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 GZMMP51124 257 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 SNRPD1P62314 119 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 GAGE1Q13065 139 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 NDUFAF6Q330K2 333 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 GPR153Q6NV75 609 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 BAIAP2L2Q6UXY1 529 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 CXXC5Q7LFL8 322 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 GID4Q8IVV7 300 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 RDH10Q8IZV5 341 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 MYLIPQ8WY64 445 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 NUDT11Q96G61 164 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 COQ10AQ96MF6 247 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 GFM1Q96RP9 751 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 SLC29A3Q9BZD2 475 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 RNF208Q9H0X6 261 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 HCFC1R1Q9NWW0 138 aa6.99□□□□□ -1.29
PDLIM5-219ENST00000514743 SEC14L3Q9UDX4 400 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms