RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 RPS4Y1P22090 263 aaKnown RBP8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 ELAVL4P26378 380 aaKnown RBP8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 PCGF2P35227 344 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 GSK3BP49841 420 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 TXNL4AP83876 142 aaKnown RBP8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 LIPEQ05469 1076 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 C19orf57Q0VDD7 668 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 FGFBP1Q14512 234 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 C3AR1Q16581 482 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 GLIPR1L2Q4G1C9 344 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 MRPL2Q5T653 305 aaKnown RBP8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 ARSKQ6UWY0 536 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 HACD2Q6Y1H2 254 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 FGD2Q7Z6J4 655 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 SERPINA11Q86U17 422 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 FADS6Q8N9I5 356 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 SMYD1Q8NB12 490 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 C11orf65Q8NCR3 313 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 FAM156AQ8NDB6 213 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 RBM15BQ8NDT2 890 aaKnown RBP8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 FAM83FQ8NEG4 500 aaPredicted RBP8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 CNOT9Q92600 299 aaKnown RBP8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 MIB2Q96AX9 1013 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 ZNF524Q96C55 264 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 NSL1Q96IY1 281 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 ZNF583Q96ND8 569 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 HOXD1Q9GZZ0 328 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 UBQLN3Q9H347 655 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 EXO5Q9H790 373 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 ZDHHC11Q9H8X9 412 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 POLE3Q9NRF9 147 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 AGPAT4Q9NRZ5 378 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 RLIMQ9NVW2 624 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 ADA2Q9NZK5 511 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 SEC14L3Q9UDX4 400 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 SH3BGRL2Q9UJC5 107 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 ANGPT4Q9Y264 503 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 CHST2Q9Y4C5 530 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 SVILO95425 2214 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 RELNP78509 3460 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 C15orf38-AP3S2A0A0A6YYH1 394 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 A0A1B0GTH9 108 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 B2RBV5 119 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 GTPBP1O00178 669 aaKnown RBP8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 TPST1O60507 370 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 GCM2O75603 506 aaPredicted RBP8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 SOX30O94993 753 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 NUDT14O95848 222 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 NPPAP01160 153 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 DBIP07108 87 aaKnown RBP8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 GKN3PP0CG01 181 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 NCK1P16333 377 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 IL7RP16871 459 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 HK1P19367 917 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 TCN1P20061 433 aaPredicted RBP8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 GNLYP22749 145 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 DPP4P27487 766 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 LCN1P31025 176 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 RYKP34925 604 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 MSX2P35548 267 aaPredicted RBP8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 PGM1P36871 562 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 MAGEA8P43361 318 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 CRYBA2P53672 197 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 C17orf67Q0P5P2 114 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 FOXF1Q12946 379 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 SKP2Q13309 424 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 TOMM34Q15785 309 aaPredicted RBP8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 ZNF630Q2M218 657 aaPredicted RBP8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 HYAL4Q2M3T9 481 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 VMACQ2NL98 169 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 LRRC23Q53EV4 343 aaPredicted RBP8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 DCST1Q5T197 706 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 RAET1LQ5VY80 246 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 REEP3Q6NUK4 255 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 GFRALQ6UXV0 394 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 TRILQ7L0X0 811 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 ARPINQ7Z6K5 226 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 MTERF4Q7Z6M4 381 aaKnown RBP8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 CHERPQ8IWX8 916 aaKnown RBP8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 PEX5LQ8IYB4 626 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 DEFB107AQ8IZN7 70 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 CLIP4Q8N3C7 705 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 HIPK4Q8NE63 616 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 OR2T12Q8NG77 320 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 OR14L1PQ8NHC6 308 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 B4GALNT2Q8NHY0 566 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 TAMM41Q96BW9 452 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 C1GALT1C1Q96EU7 318 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 REXO5Q96IC2 774 aaKnown RBP8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 BARD1Q99728 777 aaKnown RBP8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 SH3GL1Q99961 368 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 LDAHQ9H6V9 325 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 BCL2L10Q9HD36 194 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 THUMPD1Q9NXG2 353 aaKnown RBP8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 DNAJB12Q9NXW2 375 aaKnown RBP8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 CALML5Q9NZT1 146 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 ABCD2Q9UBJ2 740 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 GPC6Q9Y625 555 aaPredicted RBP8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 MED12Q93074 2177 aa8.9□□□□□ -0.98
TOPBP1-209ENST00000513818 ZNF407Q9C0G0 2248 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms