RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 CTU2Q2VPK5 515 aaKnown RBP20.63■□□□□ 0.89
SNF8-209ENST00000510558 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.63■□□□□ 0.89
SNF8-209ENST00000510558 PPP4R4Q6NUP7 873 aa20.63■□□□□ 0.89
SNF8-209ENST00000510558 C6orf120Q7Z4R8 191 aa20.63■□□□□ 0.89
SNF8-209ENST00000510558 LRRC34Q8IZ02 419 aa20.63■□□□□ 0.89
SNF8-209ENST00000510558 CLEC4FQ8N1N0 589 aa20.63■□□□□ 0.89
SNF8-209ENST00000510558 OR4A15Q8NGL6 344 aa20.63■□□□□ 0.89
SNF8-209ENST00000510558 OR10D3Q8NH80 312 aa20.63■□□□□ 0.89
SNF8-209ENST00000510558 POC1BQ8TC44 478 aa20.63■□□□□ 0.89
SNF8-209ENST00000510558 ADGRG7Q96K78 797 aa20.63■□□□□ 0.89
SNF8-209ENST00000510558 SLC35G5Q96KT7 338 aa20.63■□□□□ 0.89
SNF8-209ENST00000510558 OPN3Q9H1Y3 402 aaPredicted RBP20.63■□□□□ 0.89
SNF8-209ENST00000510558 SERHL2Q9H4I8 314 aa20.63■□□□□ 0.89
SNF8-209ENST00000510558 MEAF6Q9HAF1 191 aa20.63■□□□□ 0.89
SNF8-209ENST00000510558 HEATR5AQ86XA9 2040 aa20.62■□□□□ 0.89
SNF8-209ENST00000510558 RNF103-CHMP3A0A140T963 221 aa20.62■□□□□ 0.89
SNF8-209ENST00000510558 NPIPB9F8W1W9 429 aa20.62■□□□□ 0.89
SNF8-209ENST00000510558 H3BNH8 94 aa20.62■□□□□ 0.89
SNF8-209ENST00000510558 OIP5O43482 229 aa20.62■□□□□ 0.89
SNF8-209ENST00000510558 OPN1LWP04000 364 aa20.62■□□□□ 0.89
SNF8-209ENST00000510558 LINGO3P0C6S8 592 aa20.62■□□□□ 0.89
SNF8-209ENST00000510558 CD1EP15812 388 aa20.62■□□□□ 0.89
SNF8-209ENST00000510558 MATN1P21941 496 aa20.62■□□□□ 0.89
SNF8-209ENST00000510558 SLC6A8P48029 635 aa20.62■□□□□ 0.89
SNF8-209ENST00000510558 FAM27E3Q08E93 113 aa20.62■□□□□ 0.89
SNF8-209ENST00000510558 FGFBP1Q14512 234 aa20.62■□□□□ 0.89
SNF8-209ENST00000510558 GUSBP1Q15486 140 aa20.62■□□□□ 0.89
SNF8-209ENST00000510558 CBLN3Q6UW01 205 aa20.62■□□□□ 0.89
SNF8-209ENST00000510558 ZNF614Q8N883 585 aa20.62■□□□□ 0.89
SNF8-209ENST00000510558 TESCQ96BS2 214 aa20.62■□□□□ 0.89
SNF8-209ENST00000510558 SDF2Q99470 211 aa20.62■□□□□ 0.89
SNF8-209ENST00000510558 PRRG4Q9BZD6 226 aa20.62■□□□□ 0.89
SNF8-209ENST00000510558 TMEM185BQ9H7F4 350 aa20.62■□□□□ 0.89
SNF8-209ENST00000510558 CCM2LQ9NUG4 571 aaPredicted RBP20.62■□□□□ 0.89
SNF8-209ENST00000510558 PAQR5Q9NXK6 330 aaPredicted RBP20.62■□□□□ 0.89
SNF8-209ENST00000510558 PCDHGB4Q9UN71 923 aa20.62■□□□□ 0.89
SNF8-209ENST00000510558 CARD8Q9Y2G2 431 aa20.62■□□□□ 0.89
SNF8-209ENST00000510558 TMEM120BA0PK00 339 aa20.61■□□□□ 0.89
SNF8-209ENST00000510558 DUXAA6NLW8 204 aa20.61■□□□□ 0.89
SNF8-209ENST00000510558 ANKRD28O15084 1053 aa20.61■□□□□ 0.89
SNF8-209ENST00000510558 SCN2BO60939 215 aa20.61■□□□□ 0.89
SNF8-209ENST00000510558 CGAP01215 116 aa20.61■□□□□ 0.89
SNF8-209ENST00000510558 ME2P23368 584 aa20.61■□□□□ 0.89
SNF8-209ENST00000510558 CD79BP40259 229 aa20.61■□□□□ 0.89
SNF8-209ENST00000510558 PCYT1AP49585 367 aa20.61■□□□□ 0.89
SNF8-209ENST00000510558 P2RX1P51575 399 aa20.61■□□□□ 0.89
SNF8-209ENST00000510558 WDR4P57081 412 aaKnown RBP20.61■□□□□ 0.89
SNF8-209ENST00000510558 PHC1P78364 1004 aa20.61■□□□□ 0.89
SNF8-209ENST00000510558 FOXF1Q12946 379 aa20.61■□□□□ 0.89
SNF8-209ENST00000510558 ZNF474Q6S9Z5 364 aaPredicted RBP20.61■□□□□ 0.89
SNF8-209ENST00000510558 ANKRD46Q86W74 232 aa20.61■□□□□ 0.89
SNF8-209ENST00000510558 CHDHQ8NE62 594 aaPredicted RBP20.61■□□□□ 0.89
SNF8-209ENST00000510558 OR2V1Q8NHB1 315 aa20.61■□□□□ 0.89
SNF8-209ENST00000510558 NDRG3Q9UGV2 375 aa20.61■□□□□ 0.89
SNF8-209ENST00000510558 ICAM5Q9UMF0 924 aa20.61■□□□□ 0.89
SNF8-209ENST00000510558 PLEKHA6Q9Y2H5 1048 aa20.61■□□□□ 0.89
SNF8-209ENST00000510558 DTNAQ9Y4J8 743 aa20.61■□□□□ 0.89
SNF8-209ENST00000510558 A0A0J9YW62 118 aa20.6■□□□□ 0.89
SNF8-209ENST00000510558 PRSS51A0A1B0GVH4 220 aa20.6■□□□□ 0.89
SNF8-209ENST00000510558 GTPBP1O00178 669 aaKnown RBP20.6■□□□□ 0.89
SNF8-209ENST00000510558 TNFSF11O14788 317 aa20.6■□□□□ 0.89
SNF8-209ENST00000510558 ADAMDEC1O15204 470 aa20.6■□□□□ 0.89
SNF8-209ENST00000510558 CXCL13O43927 109 aa20.6■□□□□ 0.89
SNF8-209ENST00000510558 NUDT14O95848 222 aa20.6■□□□□ 0.89
SNF8-209ENST00000510558 AK1P00568 194 aa20.6■□□□□ 0.89
SNF8-209ENST00000510558 CD8BP10966 210 aa20.6■□□□□ 0.89
SNF8-209ENST00000510558 IL11P20809 199 aa20.6■□□□□ 0.89
SNF8-209ENST00000510558 EIF1P41567 113 aaKnown RBP20.6■□□□□ 0.89
SNF8-209ENST00000510558 CLNS1AP54105 237 aaKnown RBP20.6■□□□□ 0.89
SNF8-209ENST00000510558 SUMO3P55854 103 aaPredicted RBP20.6■□□□□ 0.89
SNF8-209ENST00000510558 NDUFAF6Q330K2 333 aa20.6■□□□□ 0.89
SNF8-209ENST00000510558 ANXA8L1Q5VT79 327 aa20.6■□□□□ 0.89
SNF8-209ENST00000510558 OGFOD2Q6N063 350 aa20.6■□□□□ 0.89
SNF8-209ENST00000510558 ESPNLQ6ZVH7 1005 aa20.6■□□□□ 0.89
SNF8-209ENST00000510558 FAM214BQ7L5A3 538 aa20.6■□□□□ 0.89
SNF8-209ENST00000510558 MCTS1Q9ULC4 181 aaKnown RBP20.6■□□□□ 0.89
SNF8-209ENST00000510558 EDARQ9UNE0 448 aa20.6■□□□□ 0.89
SNF8-209ENST00000510558 PROCRQ9UNN8 238 aa20.6■□□□□ 0.89
SNF8-209ENST00000510558 TESMINQ9Y4I5 508 aa20.6■□□□□ 0.89
SNF8-209ENST00000510558 SDHDO14521 159 aa20.59■□□□□ 0.89
SNF8-209ENST00000510558 SYNGR4O95473 234 aa20.59■□□□□ 0.89
SNF8-209ENST00000510558 CPSF4O95639 269 aaKnown RBP20.59■□□□□ 0.89
SNF8-209ENST00000510558 HRGP04196 525 aa20.59■□□□□ 0.89
SNF8-209ENST00000510558 ELK4P28324 431 aa20.59■□□□□ 0.89
SNF8-209ENST00000510558 POU4F3Q15319 338 aa20.59■□□□□ 0.89
SNF8-209ENST00000510558 DPY19L1Q2PZI1 675 aa20.59■□□□□ 0.89
SNF8-209ENST00000510558 SPANXN4Q5MJ08 99 aa20.59■□□□□ 0.89
SNF8-209ENST00000510558 PDZK1Q5T2W1 519 aa20.59■□□□□ 0.89
SNF8-209ENST00000510558 HBMQ6B0K9 141 aa20.59■□□□□ 0.89
SNF8-209ENST00000510558 LILRA2Q8N149 483 aa20.59■□□□□ 0.89
SNF8-209ENST00000510558 ZNF610Q8N9Z0 462 aa20.59■□□□□ 0.89
SNF8-209ENST00000510558 VPS37AQ8NEZ2 397 aa20.59■□□□□ 0.89
SNF8-209ENST00000510558 MGARPQ8TDB4 240 aa20.59■□□□□ 0.89
SNF8-209ENST00000510558 KLHL15Q96M94 604 aa20.59■□□□□ 0.89
SNF8-209ENST00000510558 SLC39A3Q9BRY0 314 aa20.59■□□□□ 0.89
SNF8-209ENST00000510558 NMUR2Q9GZQ4 415 aa20.59■□□□□ 0.89
SNF8-209ENST00000510558 OR51I1Q9H343 314 aa20.59■□□□□ 0.89
SNF8-209ENST00000510558 ELOVL5Q9NYP7 299 aa20.59■□□□□ 0.89
SNF8-209ENST00000510558 CLEC4AQ9UMR7 237 aa20.59■□□□□ 0.89
SNF8-209ENST00000510558 E9PBE3 544 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms