RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 PRDM12Q9H4Q4 367 aa4.18□□□□□ -1.74
NIPBL-206ENST00000509429 ACTL8Q9H568 366 aa4.18□□□□□ -1.74
NIPBL-206ENST00000509429 GAREM1Q9H706 876 aa4.18□□□□□ -1.74
NIPBL-206ENST00000509429 HHATLQ9HCP6 504 aa4.18□□□□□ -1.74
NIPBL-206ENST00000509429 MYNNQ9NPC7 610 aa4.18□□□□□ -1.74
NIPBL-206ENST00000509429 TMEM161AQ9NX61 479 aa4.18□□□□□ -1.74
NIPBL-206ENST00000509429 HAO2Q9NYQ3 351 aa4.18□□□□□ -1.74
NIPBL-206ENST00000509429 MDFICQ9P1T7 246 aa4.18□□□□□ -1.74
NIPBL-206ENST00000509429 SLC17A6Q9P2U8 582 aa4.18□□□□□ -1.74
NIPBL-206ENST00000509429 RNF14Q9UBS8 474 aa4.18□□□□□ -1.74
NIPBL-206ENST00000509429 ZNF282Q9UDV7 671 aaPredicted RBP4.18□□□□□ -1.74
NIPBL-206ENST00000509429 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.18□□□□□ -1.74
NIPBL-206ENST00000509429 ELF5Q9UKW6 265 aaPredicted RBP4.18□□□□□ -1.74
NIPBL-206ENST00000509429 CBLCQ9ULV8 474 aa4.18□□□□□ -1.74
NIPBL-206ENST00000509429 PADI3Q9ULW8 664 aa4.18□□□□□ -1.74
NIPBL-206ENST00000509429 CNTN6Q9UQ52 1028 aa4.18□□□□□ -1.74
NIPBL-206ENST00000509429 GSTK1Q9Y2Q3 226 aa4.18□□□□□ -1.74
NIPBL-206ENST00000509429 MRPS18CQ9Y3D5 142 aaKnown RBP4.18□□□□□ -1.74
NIPBL-206ENST00000509429 POLR3HQ9Y535 204 aaPredicted RBP4.18□□□□□ -1.74
NIPBL-206ENST00000509429 ACTL7AQ9Y615 435 aa4.18□□□□□ -1.74
NIPBL-206ENST00000509429 KPTNQ9Y664 436 aa4.18□□□□□ -1.74
NIPBL-206ENST00000509429 CDY2AQ9Y6F7 541 aa4.18□□□□□ -1.74
NIPBL-206ENST00000509429 MROH7-TTC4A0A0A0MT08 1334 aa4.18□□□□□ -1.74
NIPBL-206ENST00000509429 SLIT1O75093 1534 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 KCNE1BA0A087WTH5 132 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 TRBV7-9A0A0J9YWB2 115 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 A0A1B0GV72 72 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 TCRBV5S4A2TA0A5A2 114 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 MBD3L4A6NDZ8 208 aaPredicted RBP4.17□□□□□ -1.74
NIPBL-206ENST00000509429 MBD3L3A6NE82 208 aaPredicted RBP4.17□□□□□ -1.74
NIPBL-206ENST00000509429 FAM90A7PA6NKC0 464 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 HEPACAM2A8MVW5 462 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 FAM90A22PA8MWA6 464 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 FAM90A12PA8MX19 464 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 FAM90A23PA8MXZ1 464 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 E5RJQ4 531 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 KPNA4O00629 521 aaPredicted RBP4.17□□□□□ -1.74
NIPBL-206ENST00000509429 GOSR2O14653 212 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 PHYHO14832 338 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 KLF11O14901 512 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 B4GALT5O43286 388 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 SDC3O75056 442 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 SULT1C4O75897 302 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 CTDNEP1O95476 244 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 H6PDO95479 791 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 FADS2O95864 444 aaKnown RBP4.17□□□□□ -1.74
NIPBL-206ENST00000509429 FAM107AO95990 144 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 MOCS2O96007 188 aaPredicted RBP4.17□□□□□ -1.74
NIPBL-206ENST00000509429 CYB5R3P00387 301 aaPredicted RBP4.17□□□□□ -1.74
NIPBL-206ENST00000509429 SERPINA1P01009 418 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 IFNA5P01569 189 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 C4BPAP04003 597 aaKnown RBP4.17□□□□□ -1.74
NIPBL-206ENST00000509429 TCRBP04435 133 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 SERPIND1P05546 499 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 SCGB1A1P11684 91 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 FPR1P21462 350 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 DRD1P21728 446 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 ITGA3P26006 1051 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 MST1P26927 711 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 CALML3P27482 149 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 IL1R2P27930 398 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 HTR2AP28223 471 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 ECHS1P30084 290 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 SLC6A1P30531 599 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 SSTR2P30874 369 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 SDHAP31040 664 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 TIMP3P35625 211 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 AQP2P41181 271 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 RPL5P46777 297 aaKnown RBP4.17□□□□□ -1.74
NIPBL-206ENST00000509429 CYB561P49447 251 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 RBP2P50120 134 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 IDH3GP51553 393 aaPredicted RBP4.17□□□□□ -1.74
NIPBL-206ENST00000509429 CCR6P51684 374 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 AKR1D1P51857 326 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 CNN1P51911 297 aaKnown RBP4.17□□□□□ -1.74
NIPBL-206ENST00000509429 ART1P52961 327 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 PLA2G16P53816 162 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 TFAMQ00059 246 aaKnown RBP4.17□□□□□ -1.74
NIPBL-206ENST00000509429 SORDQ00796 357 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 SLC13A2Q13183 592 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 ORC2Q13416 577 aaPredicted RBP4.17□□□□□ -1.74
NIPBL-206ENST00000509429 MED21Q13503 144 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 FHL3Q13643 280 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 SELPLGQ14242 412 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 ACOX1Q15067 660 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 GPR19Q15760 415 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 ATP6AP1Q15904 470 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 CCDC6Q16204 474 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 HAGHQ16775 308 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 CDO1Q16878 200 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 SOWAHAQ2M3V2 549 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 OR2B11Q5JQS5 317 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 KHDC1LQ5JSQ8 128 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 CBWD5Q5RIA9 395 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 CERCAMQ5T4B2 595 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 LGSNQ5TDP6 509 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 PRAMEF7Q5VXH5 474 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 PRR5LQ6MZQ0 368 aa4.17□□□□□ -1.74
NIPBL-206ENST00000509429 ZNF544Q6NX49 715 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms