RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 MARCOQ9UEW3 520 aaPredicted RBP16.8■□□□□ 0.28
UBE3D-207ENST00000509102 MCTS1Q9ULC4 181 aaKnown RBP16.8■□□□□ 0.28
UBE3D-207ENST00000509102 DTNAQ9Y4J8 743 aa16.8■□□□□ 0.28
UBE3D-207ENST00000509102 POLQO75417 2590 aa16.8■□□□□ 0.28
UBE3D-207ENST00000509102 PDZD2O15018 2839 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 GJE1A6NN92 205 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 H0YC42 278 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 SDHDO14521 159 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 MSTNO14793 375 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 SNNO75324 88 aaPredicted RBP16.79■□□□□ 0.28
UBE3D-207ENST00000509102 CTAG2O75638 210 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 GOSR1O95249 250 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 PLGP00747 810 aaPredicted RBP16.79■□□□□ 0.28
UBE3D-207ENST00000509102 EPXP11678 715 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 ANXA11P50995 505 aaKnown RBP16.79■□□□□ 0.28
UBE3D-207ENST00000509102 P2RX1P51575 399 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 TPD52P55327 224 aaPredicted RBP16.79■□□□□ 0.28
UBE3D-207ENST00000509102 HPCAP84074 193 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 ZNF117Q03924 483 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 SPANXN4Q5MJ08 99 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 NXNQ6DKJ4 435 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 ESPNLQ6ZVH7 1005 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 TMCO5AQ8N6Q1 288 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 CHDHQ8NE62 594 aaPredicted RBP16.79■□□□□ 0.28
UBE3D-207ENST00000509102 TOR1AIP2Q8NFQ8 470 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 FNDC9Q8TBE3 224 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 FIG4Q92562 907 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 ARL8AQ96BM9 186 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 TLCD1Q96CP7 247 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 ZNF845Q96IR2 970 aaPredicted RBP16.79■□□□□ 0.28
UBE3D-207ENST00000509102 SDF2Q99470 211 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 NMUR2Q9GZQ4 415 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 CLEC4MQ9H2X3 399 aaPredicted RBP16.79■□□□□ 0.28
UBE3D-207ENST00000509102 RNF122Q9H9V4 155 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 AIG1Q9NVV5 245 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 GALNT8Q9NY28 637 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 NDRG3Q9UGV2 375 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 CARD8Q9Y2G2 431 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 KCNE3Q9Y6H6 103 aa16.79■□□□□ 0.28
UBE3D-207ENST00000509102 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 NPIPA5A0A0B4J1W7 369 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 GOLGA8QA0A0J9YX86 632 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 GOLGA8OA6NCC3 632 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 A6NNC1 897 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 NPIPA7E9PJI5 369 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 GOLGA8NF8WBI6 632 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 CASKO14936 926 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 ANKRD28O15084 1053 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 TNFSF13O75888 250 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 NPIPA8P0DM63 369 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 UBL4AP11441 157 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 ELK4P28324 431 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 ADH6P28332 368 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 EPHA3P29320 983 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 KHKP50053 298 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 NME5P56597 212 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 CASP8Q14790 479 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 GGNQ86UU5 652 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 GLB1L3Q8NCI6 653 aaPredicted RBP16.78■□□□□ 0.28
UBE3D-207ENST00000509102 MIPOL1Q8TD10 442 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 REXO5Q96IC2 774 aaKnown RBP16.78■□□□□ 0.28
UBE3D-207ENST00000509102 GPATCH1Q9BRR8 931 aaKnown RBP16.78■□□□□ 0.28
UBE3D-207ENST00000509102 SLC39A3Q9BRY0 314 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 OR51I1Q9H343 314 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 TIGARQ9NQ88 270 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 EMC9Q9Y3B6 208 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 GPC6Q9Y625 555 aaPredicted RBP16.78■□□□□ 0.28
UBE3D-207ENST00000509102 OTOGQ6ZRI0 2925 aa16.78■□□□□ 0.28
UBE3D-207ENST00000509102 CSMD1Q96PZ7 3565 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 A8MXE2 369 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 ZNF264O43296 627 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 EIF4E2O60573 245 aaKnown RBP16.77■□□□□ 0.28
UBE3D-207ENST00000509102 IDO1P14902 403 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 KCNJ5P48544 419 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 CCR4P51679 360 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 SIRPAP78324 504 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 CBFBQ13951 182 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 DAZAP2Q15038 168 aaPredicted RBP16.77■□□□□ 0.28
UBE3D-207ENST00000509102 GPR68Q15743 365 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 ARHGAP11BQ3KRB8 267 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 AGBL2Q5U5Z8 902 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 GTF2IRD2BQ6EKJ0 949 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 GTF2IRD2Q86UP8 949 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 LILRA2Q8N149 483 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 CLEC4FQ8N1N0 589 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 GOLGA6L1Q8N7Z2 621 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 OR10D3Q8NH80 312 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 OR2V1Q8NHB1 315 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 RFWD2Q8NHY2 731 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 XAGE5Q8WWM1 108 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 OIT3Q8WWZ8 545 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 CCDC115Q96NT0 180 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 DACH2Q96NX9 599 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 PANX1Q96RD7 426 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 SLC35A5Q9BS91 424 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 WDR55Q9H6Y2 383 aaPredicted RBP16.77■□□□□ 0.28
UBE3D-207ENST00000509102 TMEM185BQ9H7F4 350 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 POLE3Q9NRF9 147 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 RASSF1Q9NS23 344 aa16.77■□□□□ 0.28
UBE3D-207ENST00000509102 BTNL2Q9UIR0 455 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms