RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 MATN1P21941 496 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 LCN1P31025 176 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 ART1P52961 327 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 C21orf58P58505 322 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 MAGOHP61326 146 aaKnown RBP13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 SORDQ00796 357 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 FOXF1Q12946 379 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 GPR68Q15743 365 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 SPANXN4Q5MJ08 99 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 BTLAQ7Z6A9 289 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 CDC20BQ86Y33 519 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 MISPQ8IVT2 679 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 GTPBP8Q8N3Z3 284 aaPredicted RBP13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 METTL25Q8N6Q8 603 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 POC1BQ8TC44 478 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 ZBTB8AQ96BR9 441 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 STARD4Q96DR4 205 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 ARSGQ96EG1 525 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 PCDHGB4Q9UN71 923 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 SH3D21A4FU49 640 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 A8MXE2 369 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 RNASET2O00584 256 aaKnown RBP13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 CXCL13O43927 109 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 ERLIN1O75477 346 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 SNUPNO95149 360 aaKnown RBP13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 ALDOCP09972 364 aaKnown RBP13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 EPXP11678 715 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 ME2P23368 584 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 SFTPDP35247 375 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 KIR2DL2P43627 348 aaPredicted RBP13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 SLC6A8P48029 635 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 KCNJ5P48544 419 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 CCR4P51679 360 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 PHC1P78364 1004 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 FAM27E3Q08E93 113 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 TOMM34Q15785 309 aaPredicted RBP13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 KLHL26Q53HC5 615 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 PDZK1Q5T2W1 519 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 TNFAIP8L2Q6P589 184 aaPredicted RBP13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 BHLHB9Q6PI77 547 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 C16orf62Q7Z3J2 963 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 ZNF454Q8N9F8 522 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 ATP6V1C2Q8NEY4 427 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 OR8J2Q8NGG1 315 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 OR10D3Q8NH80 312 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 RAB8BQ92930 207 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 TEX37Q96LM6 180 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 OR51I1Q9H343 314 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 WDR55Q9H6Y2 383 aaPredicted RBP13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 RNF122Q9H9V4 155 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 MEAF6Q9HAF1 191 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 STOML1Q9UBI4 398 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 HAO1Q9UJM8 370 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 ZNF175Q9Y473 711 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 AKAP6Q13023 2319 aa13.3□□□□□ -0.28
UBE2D3-228ENST00000508974 HEATR5AQ86XA9 2040 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 CENPVL1A0A0U1RR11 272 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 H3BNH8 94 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 SDHDO14521 159 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 MSTNO14793 375 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 ANKRD28O15084 1053 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 CYP7B1O75881 506 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 PLGP00747 810 aaPredicted RBP13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 C1QCP02747 245 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 CRHP06850 196 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 LINGO3P0C6S8 592 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 PSMA4P25789 261 aaKnown RBP13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 EPHA3P29320 983 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 SHC1P29353 583 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 IST1P53990 364 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 ATP12AP54707 1039 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 UFM1P61960 85 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 EXOC3L2Q2M3D2 409 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 FAM174BQ3ZCQ3 159 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 HBMQ6B0K9 141 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 NXNQ6DKJ4 435 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 MTERF4Q7Z6M4 381 aaKnown RBP13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 HMGN2P46Q86SG4 172 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 LILRA2Q8N149 483 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 FBXO27Q8NI29 283 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 ACTRT2Q8TDY3 377 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 MARK4Q96L34 752 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 SDF2Q99470 211 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 HOXD1Q9GZZ0 328 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 HHATLQ9HCP6 504 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 CCM2LQ9NUG4 571 aaPredicted RBP13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 NKIRAS1Q9NYS0 192 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 MKLN1Q9UL63 735 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 PLEKHA6Q9Y2H5 1048 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 DTNAQ9Y4J8 743 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 F8P00451 2351 aa13.29□□□□□ -0.28
UBE2D3-228ENST00000508974 A0A0J9YW62 118 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 PRSS51A0A1B0GVH4 220 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 E9PBE3 544 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 FCMRO60667 390 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 SCN2BO60939 215 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 SYNGR4O95473 234 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 OR12D1P0DN82 309 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 UBL4AP11441 157 aa13.28□□□□□ -0.28
UBE2D3-228ENST00000508974 FCGR2AP12318 317 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms