RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 PSD4Q8NDX1 1056 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 DUSP18Q8NEJ0 188 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 LMX1AQ8TE12 382 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 ACOT12Q8WYK0 555 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 SERINC2Q96SA4 455 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 SOSTQ9BQB4 213 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 KATNB1Q9BVA0 655 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 EXOGQ9Y2C4 368 aaKnown RBP10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 A0A087WUU8 490 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 B4DXG7 233 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 EMC8O43402 210 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 B3GALT2O43825 422 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 SLC19A2O60779 497 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 AGR2O95994 175 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 DCNP07585 359 aaKnown RBP10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 ZNF24P17028 368 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 AZGP1P25311 298 aaKnown RBP10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 ERP29P30040 261 aaKnown RBP10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 RCVRNP35243 200 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 MAN2A2P49641 1150 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 RAB25P57735 213 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 DAB2P98082 770 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 BDH1Q02338 343 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 ID2Q02363 134 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 DECR1Q16698 335 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 TRIQKQ629K1 86 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 FAM111BQ6SJ93 734 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 PAQR6Q6TCH4 344 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 NOXA1Q86UR1 476 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 COMTD1Q86VU5 262 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 GATAD2AQ86YP4 633 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 PEX5LQ8IYB4 626 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 TCTE3Q8IZS6 198 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 KLHL36Q8N4N3 616 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 OR52N1Q8NH53 320 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 SLC9A6Q92581 669 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 ELP4Q96EB1 424 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 SHDQ96IW2 340 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 SLX1AQ9BQ83 275 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 C11orf54Q9H0W9 315 aaPredicted RBP10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 TBC1D17Q9HA65 648 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 IL21RQ9HBE5 538 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 POMT2Q9UKY4 750 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 KCNE3Q9Y6H6 103 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 SCN2AQ99250 2005 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 TECTAO75443 2155 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 FAM86C2PA6NEL3 165 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 URADA6NGE7 173 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 DUXAA6NLW8 204 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 M0R296 226 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 CASKO14936 926 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 CHRM4P08173 479 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 BCKDHBP21953 392 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 FPR3P25089 353 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 PRKAR1BP31321 381 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 RPS25P62851 125 aaKnown RBP10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 RACK1P63244 317 aaKnown RBP10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 ELOCQ15369 112 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 ZNF311Q5JNZ3 666 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 ARMC6Q6NXE6 501 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 BCDIN3DQ7Z5W3 292 aaKnown RBP10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 ARL14Q8N4G2 192 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 CSNK1A1LQ8N752 337 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 AVL9Q8NBF6 648 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 ZNF485Q8NCK3 441 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 TMEM52Q8NDY8 209 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 CADM4Q8NFZ8 388 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 GATAD2BQ8WXI9 593 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 GON7Q9BXV9 100 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 QRSL1Q9H0R6 528 aaKnown RBP10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 CACYBPQ9HB71 228 aaKnown RBP10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 RBFOX1Q9NWB1 397 aaKnown RBP10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 NLGN3Q9NZ94 848 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 H2AFY2Q9P0M6 372 aaPredicted RBP10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 CLCA2Q9UQC9 943 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 SLC22A7Q9Y694 548 aa10.24□□□□□ -0.77
SH3RF1-203ENST00000508685 LDB3O75112 727 aa10.23□□□□□ -0.77
SH3RF1-203ENST00000508685 LIMS3P0CW19 117 aa10.23□□□□□ -0.77
SH3RF1-203ENST00000508685 LIMS4P0CW20 117 aa10.23□□□□□ -0.77
SH3RF1-203ENST00000508685 SLC2A2P11168 524 aaPredicted RBP10.23□□□□□ -0.77
SH3RF1-203ENST00000508685 SLC1A3P43003 542 aa10.23□□□□□ -0.77
SH3RF1-203ENST00000508685 MAP2K3P46734 347 aa10.23□□□□□ -0.77
SH3RF1-203ENST00000508685 EVX1P49640 407 aa10.23□□□□□ -0.77
SH3RF1-203ENST00000508685 CSNK1EP49674 416 aaKnown RBP10.23□□□□□ -0.77
SH3RF1-203ENST00000508685 RNF144AP50876 292 aaPredicted RBP10.23□□□□□ -0.77
SH3RF1-203ENST00000508685 CDH11P55287 796 aa10.23□□□□□ -0.77
SH3RF1-203ENST00000508685 DEFB133Q30KQ1 61 aa10.23□□□□□ -0.77
SH3RF1-203ENST00000508685 C6orf132Q5T0Z8 1188 aa10.23□□□□□ -0.77
SH3RF1-203ENST00000508685 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.23□□□□□ -0.77
SH3RF1-203ENST00000508685 TYW3Q6IPR3 259 aaKnown RBP10.23□□□□□ -0.77
SH3RF1-203ENST00000508685 KIF18BQ86Y91 864 aa10.23□□□□□ -0.77
SH3RF1-203ENST00000508685 CACTIN-AS1Q8N1I8 211 aa10.23□□□□□ -0.77
SH3RF1-203ENST00000508685 LRRC25Q8N386 305 aaPredicted RBP10.23□□□□□ -0.77
SH3RF1-203ENST00000508685 SPEM1Q8N4L4 309 aa10.23□□□□□ -0.77
SH3RF1-203ENST00000508685 NUP43Q8NFH3 380 aa10.23□□□□□ -0.77
SH3RF1-203ENST00000508685 OR7G2Q8NG99 324 aa10.23□□□□□ -0.77
SH3RF1-203ENST00000508685 FAM174AQ8TBP5 190 aa10.23□□□□□ -0.77
SH3RF1-203ENST00000508685 DOK4Q8TEW6 326 aa10.23□□□□□ -0.77
SH3RF1-203ENST00000508685 ACOT11Q8WXI4 607 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms