RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 OIT3Q8WWZ8 545 aa15.31■□□□□ 0.04
CLDND1-219ENST00000508659 TM9SF2Q99805 663 aa15.31■□□□□ 0.04
CLDND1-219ENST00000508659 CCDC167Q9P0B6 97 aa15.31■□□□□ 0.04
CLDND1-219ENST00000508659 CLCF1Q9UBD9 225 aa15.31■□□□□ 0.04
CLDND1-219ENST00000508659 STOML1Q9UBI4 398 aa15.31■□□□□ 0.04
CLDND1-219ENST00000508659 DCTN4Q9UJW0 460 aa15.31■□□□□ 0.04
CLDND1-219ENST00000508659 TRIM33Q9UPN9 1127 aa15.31■□□□□ 0.04
CLDND1-219ENST00000508659 CARD8Q9Y2G2 431 aa15.31■□□□□ 0.04
CLDND1-219ENST00000508659 ZNF337Q9Y3M9 751 aa15.31■□□□□ 0.04
CLDND1-219ENST00000508659 AP4B1Q9Y6B7 739 aa15.31■□□□□ 0.04
CLDND1-219ENST00000508659 A0A0G2JND7 137 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 C7orf72A4D263 438 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 SERINC4A6NH21 518 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 ZNF264O43296 627 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 UGT2B17O75795 530 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 H6PDO95479 791 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 C1QCP02747 245 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 GUSBP08236 651 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 SNRPB2P08579 225 aaKnown RBP15.3■□□□□ 0.04
CLDND1-219ENST00000508659 ZCCHC18P0CG32 403 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 ME2P23368 584 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 CEACAM8P31997 349 aaPredicted RBP15.3■□□□□ 0.04
CLDND1-219ENST00000508659 ATP4BP51164 291 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 RPS3AP61247 264 aaKnown RBP15.3■□□□□ 0.04
CLDND1-219ENST00000508659 TFF3Q07654 80 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 FOXF1Q12946 379 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 CBFBQ13951 182 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 TMEM44Q2T9K0 475 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 NDUFAF6Q330K2 333 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 TYW3Q6IPR3 259 aaKnown RBP15.3■□□□□ 0.04
CLDND1-219ENST00000508659 SLC2A7Q6PXP3 512 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 CBLN3Q6UW01 205 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 FRRS1Q6ZNA5 592 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 P4HA3Q7Z4N8 544 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 ADGRE4PQ86SQ3 457 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 C9orf106Q8NAJ2 232 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 TOR1AIP2Q8NFQ8 470 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 RFWD2Q8NHY2 731 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 ZFP90Q8TF47 636 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 SPDL1Q96EA4 605 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 RNF145Q96MT1 663 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 ZFP3Q96NJ6 502 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 RABEP2Q9H5N1 569 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 SLC6A13Q9NSD5 602 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 P2RX2Q9UBL9 471 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 ICAM5Q9UMF0 924 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 LIPT1Q9Y234 373 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 L3MBTL1Q9Y468 752 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 UNC79Q9P2D8 2635 aa15.3■□□□□ 0.04
CLDND1-219ENST00000508659 CENPVL1A0A0U1RR11 272 aa15.29■□□□□ 0.04
CLDND1-219ENST00000508659 SLC22A20A6NK97 555 aa15.29■□□□□ 0.04
CLDND1-219ENST00000508659 CYP7B1O75881 506 aa15.29■□□□□ 0.04
CLDND1-219ENST00000508659 CSTAP01040 98 aa15.29■□□□□ 0.04
CLDND1-219ENST00000508659 TMIGD3P0DMS9 266 aaPredicted RBP15.29■□□□□ 0.04
CLDND1-219ENST00000508659 TROVE2P10155 538 aaKnown RBP eCLIP15.29■□□□□ 0.04
CLDND1-219ENST00000508659 NCF2P19878 526 aaPredicted RBP15.29■□□□□ 0.04
CLDND1-219ENST00000508659 ELK4P28324 431 aa15.29■□□□□ 0.04
CLDND1-219ENST00000508659 EIF1P41567 113 aaKnown RBP15.29■□□□□ 0.04
CLDND1-219ENST00000508659 CRATP43155 626 aa15.29■□□□□ 0.04
CLDND1-219ENST00000508659 MAGEA8P43361 318 aa15.29■□□□□ 0.04
CLDND1-219ENST00000508659 ZNF136P52737 540 aa15.29■□□□□ 0.04
CLDND1-219ENST00000508659 GTDC1Q4AE62 458 aa15.29■□□□□ 0.04
CLDND1-219ENST00000508659 COX20Q5RI15 118 aa15.29■□□□□ 0.04
CLDND1-219ENST00000508659 EIF3MQ7L2H7 374 aaKnown RBP15.29■□□□□ 0.04
CLDND1-219ENST00000508659 LIX1LQ8IVB5 337 aa15.29■□□□□ 0.04
CLDND1-219ENST00000508659 GTF2H4Q92759 462 aa15.29■□□□□ 0.04
CLDND1-219ENST00000508659 WNT2BQ93097 391 aa15.29■□□□□ 0.04
CLDND1-219ENST00000508659 TRNT1Q96Q11 434 aaKnown RBP15.29■□□□□ 0.04
CLDND1-219ENST00000508659 TPT1P8Q9HAU6 139 aa15.29■□□□□ 0.04
CLDND1-219ENST00000508659 NPDC1Q9NQX5 325 aaPredicted RBP15.29■□□□□ 0.04
CLDND1-219ENST00000508659 TMEM45AQ9NWC5 275 aa15.29■□□□□ 0.04
CLDND1-219ENST00000508659 ZNF629Q9UEG4 869 aaPredicted RBP15.29■□□□□ 0.04
CLDND1-219ENST00000508659 KCNE5Q9UJ90 142 aa15.29■□□□□ 0.04
CLDND1-219ENST00000508659 SLC35A3Q9Y2D2 325 aa15.29■□□□□ 0.04
CLDND1-219ENST00000508659 PHF3Q92576 2039 aaKnown RBP15.29■□□□□ 0.04
CLDND1-219ENST00000508659 EEF1E1-BLOC1S5C9J1V9 151 aa15.28■□□□□ 0.04
CLDND1-219ENST00000508659 H0YC42 278 aa15.28■□□□□ 0.04
CLDND1-219ENST00000508659 EIF1AYO14602 144 aaKnown RBP15.28■□□□□ 0.04
CLDND1-219ENST00000508659 EEF1E1O43324 174 aaKnown RBP15.28■□□□□ 0.04
CLDND1-219ENST00000508659 OIP5O43482 229 aa15.28■□□□□ 0.04
CLDND1-219ENST00000508659 EIF4E2O60573 245 aaKnown RBP15.28■□□□□ 0.04
CLDND1-219ENST00000508659 LINGO3P0C6S8 592 aa15.28■□□□□ 0.04
CLDND1-219ENST00000508659 UBTFL6P0CB48 400 aaPredicted RBP15.28■□□□□ 0.04
CLDND1-219ENST00000508659 NR2F1P10589 423 aa15.28■□□□□ 0.04
CLDND1-219ENST00000508659 TPD52P55327 224 aaPredicted RBP15.28■□□□□ 0.04
CLDND1-219ENST00000508659 CLDN20P56880 219 aa15.28■□□□□ 0.04
CLDND1-219ENST00000508659 SKP2Q13309 424 aa15.28■□□□□ 0.04
CLDND1-219ENST00000508659 AGKQ53H12 422 aa15.28■□□□□ 0.04
CLDND1-219ENST00000508659 BLOC1S3Q6QNY0 202 aa15.28■□□□□ 0.04
CLDND1-219ENST00000508659 PLXDC2Q6UX71 529 aa15.28■□□□□ 0.04
CLDND1-219ENST00000508659 MEX3BQ6ZN04 569 aaKnown RBP15.28■□□□□ 0.04
CLDND1-219ENST00000508659 GCNT2Q8N0V5 402 aa15.28■□□□□ 0.04
CLDND1-219ENST00000508659 ANKFN1Q8N957 763 aa15.28■□□□□ 0.04
CLDND1-219ENST00000508659 RELL2Q8NC24 303 aaPredicted RBP15.28■□□□□ 0.04
CLDND1-219ENST00000508659 OR5W2Q8NH69 310 aa15.28■□□□□ 0.04
CLDND1-219ENST00000508659 LRRC46Q96FV0 321 aa15.28■□□□□ 0.04
CLDND1-219ENST00000508659 AURKBQ96GD4 344 aaPredicted RBP15.28■□□□□ 0.04
CLDND1-219ENST00000508659 UCN2Q96RP3 112 aa15.28■□□□□ 0.04
CLDND1-219ENST00000508659 KLHDC3Q9BQ90 382 aa15.28■□□□□ 0.04
CLDND1-219ENST00000508659 SFXN3Q9BWM7 321 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms