RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 CPB2Q96IY4 423 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 LURAP1Q96LR2 239 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 SPATA13Q96N96 652 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 FIZ1Q96SL8 496 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 ZBTB18Q99592 522 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 SEPHS2Q99611 448 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 GINS4Q9BRT9 223 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 TMEM175Q9BSA9 504 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 INPP5KQ9BT40 448 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 CDCA4Q9BXL8 241 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 NKX6-2Q9C056 277 aaPredicted RBP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 GHITMQ9H3K2 345 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 ANKRD19PQ9H560 264 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 ACTR8Q9H981 624 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 CERS4Q9HA82 394 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 MRPS30Q9NP92 439 aaKnown RBP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 GSN-AS1Q9NRJ2 163 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 SIRT3Q9NTG7 399 aaPredicted RBP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 TREM2Q9NZC2 230 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 AKAP7Q9P0M2 348 aaPredicted RBP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 ZDHHC2Q9UIJ5 367 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 BTNL2Q9UIR0 455 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 RALYQ9UKM9 306 aaKnown RBP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 GSTK1Q9Y2Q3 226 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 NUBP2Q9Y5Y2 271 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 PSAT1Q9Y617 370 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 SPTBN4Q9H254 2564 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 CKAP5Q14008 2032 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 C5orf42Q9H799 3197 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 MEIKINA0A087WXM9 373 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 OR2W5A6NFC9 320 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 LINC00587B1AMM8 73 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 ZNF879B4DU55 563 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 D6RAR5 112 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 ZNF670-ZNF695F2Z2N8 137 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 F8VP50 259 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 H7C0S8 307 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 FXYD1O00168 92 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 UPK1AO00322 258 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 CXCL11O14625 94 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 IMPA2O14732 288 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 FABP7O15540 132 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 CHP2O43745 196 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 LCMT2O60294 686 aaKnown RBP4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 RP2O75695 350 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 AQP8O94778 261 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 RGS11O94810 467 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 KAT7O95251 611 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 TRUB2O95900 331 aaKnown RBP4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 VIPP01282 170 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 IFNGP01579 166 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 CHRNGP07510 517 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 FOLR2P14207 255 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 MYOGP15173 224 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 GNSP15586 552 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 UGT2B7P16662 529 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 TSPAN8P19075 237 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 RAB3BP20337 219 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 DNASE1P24855 282 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 DCTP40126 519 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 ETV5P41161 510 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 MNDAP41218 407 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC1A3P43003 542 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 LIG4P49917 911 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 CSRP3P50461 194 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 LIMK1P53667 647 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 TAS2R60P59551 318 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 RAB2AP61019 212 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 SNRPD2P62316 118 aaKnown RBP4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 PSMC6P62333 389 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 RPL7AP62424 266 aaKnown RBP4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 HERVK_113P63132 956 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 ABATP80404 500 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 OGDHQ02218 1023 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 TLE2Q04725 743 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 ZNF155Q12901 538 aaPredicted RBP4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 MAD2L1Q13257 205 aaPredicted RBP4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 CBFBQ13951 182 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 ZNF284Q2VY69 593 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 ZACNQ401N2 412 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 VPS26BQ4G0F5 336 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 IQCCQ4KMZ1 466 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 KLHL26Q53HC5 615 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 PYDC2Q56P42 97 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 C1orf220Q5T0J3 134 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 C10orf62Q5T681 223 aaPredicted RBP4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 TMEM198Q66K66 360 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 TMEM270Q6UE05 265 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 BAIAP2L2Q6UXY1 529 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 AHSA2Q719I0 299 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 TMEM135Q86UB9 458 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 TSPAN33Q86UF1 283 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 CUZD1Q86UP6 607 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 CENPLQ8N0S6 344 aaPredicted RBP4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 MS4A15Q8N5U1 240 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 ZNF557Q8N988 423 aaPredicted RBP4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 C11orf65Q8NCR3 313 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 OR2T12Q8NG77 320 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 OR52N4Q8NGI2 321 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 SPATA22Q8NHS9 363 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms