RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 CPTPQ5TA50 214 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 CDC73Q6P1J9 531 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 CBLN3Q6UW01 205 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 ESPNLQ6ZVH7 1005 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 RIMKLAQ8IXN7 391 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 OR56A1Q8NGH5 318 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 OR2V1Q8NHB1 315 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 B4GALNT2Q8NHY0 566 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 AENQ8WTP8 325 aaKnown RBP11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 OR5P2Q8WZ92 322 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 CAVIN3Q969G5 261 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 CHMP6Q96FZ7 201 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 ZC3HAV1LQ96H79 300 aaKnown RBP11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 PLSCR4Q9NRQ2 329 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 ZDHHC2Q9UIJ5 367 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 MCTS1Q9ULC4 181 aaKnown RBP11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 EMC9Q9Y3B6 208 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 FREM1Q5H8C1 2179 aa11.64□□□□□ -0.55
HMGCS1-205ENST00000508319 FN1P02751 2386 aaKnown RBP11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 ABCA2Q9BZC7 2435 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 NPIPA5A0A0B4J1W7 369 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 NPIPA7E9PJI5 369 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 TYROBPO43914 113 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 C6orf47O95873 294 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 PLGP00747 810 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 THBDP07204 575 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 NPIPA8P0DM63 369 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 ME2P23368 584 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 SHC1P29353 583 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 AGTR1P30556 359 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 CCT3P49368 545 aaKnown RBP11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 RNF144AP50876 292 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 CTBP2P56545 445 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 NKX6-1P78426 367 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 ZNF239Q16600 458 aaKnown RBP11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 EXOC3L2Q2M3D2 409 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 KLHL26Q53HC5 615 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 DCST2Q5T1A1 773 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 IL23RQ5VWK5 629 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 ANKRD34AQ69YU3 496 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 HBMQ6B0K9 141 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 STAC2Q6ZMT1 411 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 MTERF4Q7Z6M4 381 aaKnown RBP11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 FNDC5Q8NAU1 212 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 OR5AK3PQ8NH89 298 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 PHOSPHO1Q8TCT1 267 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 SFXN5Q8TD22 340 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 COQ8BQ96D53 544 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 KLHL15Q96M94 604 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 PIP5K1AQ99755 562 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 ACTRT3Q9BYD9 372 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 PRRG4Q9BZD6 226 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 ROPN1BQ9BZX4 212 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 KLHL4Q9C0H6 718 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 UBTD1Q9HAC8 227 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 ROPN1Q9HAT0 212 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 ATAD3AQ9NVI7 634 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 ICAM5Q9UMF0 924 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 KCNE3Q9Y6H6 103 aa11.63□□□□□ -0.55
HMGCS1-205ENST00000508319 NPIPB9F8W1W9 429 aa11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 SYNGR4O95473 234 aa11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 PRPS1L1P21108 318 aa11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 ATP6V1C1P21283 382 aa11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 EIF1P41567 113 aaKnown RBP11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 SUMO3P55854 103 aaPredicted RBP11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 C21orf58P58505 322 aa11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 HBA1P69905 142 aa11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 ACKR1Q16570 336 aa11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 SHEQ5VZ18 495 aa11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 EMBQ6PCB8 327 aa11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 LILRA2Q8N149 483 aa11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 LRRC75A-AS1Q8N1F1 130 aa11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 NATD1Q8N6N6 113 aa11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 ADAMTS15Q8TE58 950 aa11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 RNF128Q8TEB7 428 aa11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 C18orf12Q96KH6 178 aa11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 PKNOX2Q96KN3 472 aa11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 SMR3AQ99954 134 aa11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 DUSP26Q9BV47 211 aa11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 SRXN1Q9BYN0 137 aa11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 BHLHE41Q9C0J9 482 aaPredicted RBP11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 SERHL2Q9H4I8 314 aa11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 GLRX2Q9NS18 164 aa11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 FAF1Q9UNN5 650 aaPredicted RBP11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 ACTL7BQ9Y614 415 aa11.62□□□□□ -0.55
HMGCS1-205ENST00000508319 UQCRHLA0A096LP55 91 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 KLF4O43474 513 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 EFNA2O43921 213 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 KRT16P08779 473 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 G6PDP11413 515 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 FPR1P21462 350 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 ADH6P28332 368 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 SFTPDP35247 375 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 P2RX1P51575 399 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 RPS26P62854 115 aaKnown RBP11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 TOMM34Q15785 309 aaPredicted RBP11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 NDUFAF6Q330K2 333 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 LSM12Q3MHD2 195 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms