RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 RORCP51449 518 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 C1DQ13901 141 aaKnown RBP13.44□□□□□ -0.26
DDX41-208ENST00000507955 OR1Q1Q15612 314 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 ZNF620Q6ZNG0 422 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 CPOQ8IVL8 374 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 LINC00471Q8N535 108 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 ZDHHC1Q8WTX9 485 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 PEX11GQ96HA9 241 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 SLC38A2Q96QD8 506 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 MMP28Q9H239 520 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 C8orf33Q9H7E9 229 aaPredicted RBP13.44□□□□□ -0.26
DDX41-208ENST00000507955 HINT3Q9NQE9 182 aaKnown RBP13.44□□□□□ -0.26
DDX41-208ENST00000507955 IL20Q9NYY1 176 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 ZNF221Q9UK13 617 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 ASXL3Q9C0F0 2248 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 CHST10O43529 356 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 CBX7O95931 251 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 TSPAN19P0C672 248 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 IFNGR2P38484 337 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 GCGRP47871 477 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 BTG2P78543 158 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 MLLT11Q13015 90 aaPredicted RBP13.44□□□□□ -0.26
DDX41-208ENST00000507955 KIAA0895LQ68EN5 471 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 ZNF517Q6ZMY9 492 aaPredicted RBP13.44□□□□□ -0.26
DDX41-208ENST00000507955 RNF44Q7L0R7 432 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 ZNF619Q8N2I2 560 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 CNOT9Q92600 299 aaKnown RBP13.44□□□□□ -0.26
DDX41-208ENST00000507955 DMRTB1Q96MA1 342 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 LRRC61Q9BV99 259 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 MOV10Q9HCE1 1003 aaKnown RBP13.44□□□□□ -0.26
DDX41-208ENST00000507955 ABCB9Q9NP78 766 aa13.44□□□□□ -0.26
DDX41-208ENST00000507955 RGS13O14921 159 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 KLF4O43474 513 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 IFI30P13284 250 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 ZNF10P21506 573 aaPredicted RBP13.43□□□□□ -0.26
DDX41-208ENST00000507955 FPR3P25089 353 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 IFNA8P32881 189 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 WNT4P56705 351 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 ZNF155Q12901 538 aaPredicted RBP13.43□□□□□ -0.26
DDX41-208ENST00000507955 GAS6Q14393 721 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 NDUFAF6Q330K2 333 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 PDZK1Q5T2W1 519 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 ZNF544Q6NX49 715 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 PLBD1Q6P4A8 553 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 THSD4Q6ZMP0 1018 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 TMCO6Q96DC7 493 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 WDFY2Q96P53 400 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 MAP3K3Q99759 626 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 UBQLN3Q9H347 655 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 LYRM4Q9HD34 91 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 PLEKHB1Q9UF11 243 aaPredicted RBP13.43□□□□□ -0.26
DDX41-208ENST00000507955 BOLA1Q9Y3E2 137 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 MTCH2Q9Y6C9 303 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 COL4A2P08572 1712 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 TRAV27A0A087WT01 109 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 SLC35F4A4IF30 521 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 CDHR4A6H8M9 788 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 TFECO14948 347 aaPredicted RBP13.43□□□□□ -0.26
DDX41-208ENST00000507955 OR10H2O60403 315 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 IGKV1D-16P01601 117 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 SDC2P34741 201 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 EMDP50402 254 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 FAM53BQ14153 422 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 GLYR1Q49A26 553 aaPredicted RBP13.43□□□□□ -0.26
DDX41-208ENST00000507955 SLC25A30Q5SVS4 291 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 ARMC4Q5T2S8 1044 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 PARGQ86W56 976 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 SIRT6Q8N6T7 355 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 OR51G2Q8NGK0 314 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 OR51A7Q8NH64 312 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 SLC25A46Q96AG3 418 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 OR52D1Q9H346 318 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 SSR3Q9UNL2 185 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 CMAHPQ9Y471 501 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 PCDHGB2Q9Y5G2 931 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 NOX1Q9Y5S8 564 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 PLOD3O60568 738 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 OR5F1O95221 314 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 KRT8P05787 483 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 NID1P14543 1247 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 ATP6V1E1P36543 226 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.43□□□□□ -0.26
DDX41-208ENST00000507955 RAB40BQ12829 278 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 HNRNPA0Q13151 305 aaKnown RBP13.43□□□□□ -0.26
DDX41-208ENST00000507955 PGGHGQ32M88 737 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 MINDY4Q4G0A6 757 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 CRTC2Q53ET0 693 aaPredicted RBP13.43□□□□□ -0.26
DDX41-208ENST00000507955 KLHL22Q53GT1 634 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 AADACL4Q5VUY2 407 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 GDPGP1Q6ZNW5 385 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 MRGPREQ86SM8 312 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 OOSP2Q86WS3 158 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 OR13C2Q8NGS9 318 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 SETD6Q8TBK2 473 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 TMED9Q9BVK6 235 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 HDHD5Q9BXW7 423 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 ISG20L2Q9H9L3 353 aaKnown RBP13.43□□□□□ -0.26
DDX41-208ENST00000507955 TBC1D17Q9HA65 648 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 WSB2Q9NYS7 404 aaPredicted RBP13.43□□□□□ -0.26
DDX41-208ENST00000507955 NPAP1Q9NZP6 1156 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms