RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 ROBO4Q8WZ75 1007 aa13□□□□□ -0.33
SEC24D-208ENST00000506622 MTERF3Q96E29 417 aa13□□□□□ -0.33
SEC24D-208ENST00000506622 FCRL1Q96LA6 429 aa13□□□□□ -0.33
SEC24D-208ENST00000506622 KLHL15Q96M94 604 aa13□□□□□ -0.33
SEC24D-208ENST00000506622 RHOXF2Q9BQY4 288 aa13□□□□□ -0.33
SEC24D-208ENST00000506622 TACO1Q9BSH4 297 aaKnown RBP13□□□□□ -0.33
SEC24D-208ENST00000506622 TRMOQ9BU70 441 aa13□□□□□ -0.33
SEC24D-208ENST00000506622 BTBD2Q9BX70 525 aa13□□□□□ -0.33
SEC24D-208ENST00000506622 HDHD5Q9BXW7 423 aa13□□□□□ -0.33
SEC24D-208ENST00000506622 ZNF701Q9NV72 531 aaPredicted RBP13□□□□□ -0.33
SEC24D-208ENST00000506622 FBXO34Q9NWN3 711 aa13□□□□□ -0.33
SEC24D-208ENST00000506622 MID2Q9UJV3 735 aa13□□□□□ -0.33
SEC24D-208ENST00000506622 FBN3Q75N90 2809 aa12.99□□□□□ -0.33
SEC24D-208ENST00000506622 STAB1Q9NY15 2570 aa12.99□□□□□ -0.33
SEC24D-208ENST00000506622 GJE1A6NN92 205 aa12.99□□□□□ -0.33
SEC24D-208ENST00000506622 INAFM1C9JVW0 142 aa12.99□□□□□ -0.33
SEC24D-208ENST00000506622 KIF2AO00139 706 aaPredicted RBP12.99□□□□□ -0.33
SEC24D-208ENST00000506622 NUDT14O95848 222 aa12.99□□□□□ -0.33
SEC24D-208ENST00000506622 LINGO3P0C6S8 592 aa12.99□□□□□ -0.33
SEC24D-208ENST00000506622 ATP6V1C1P21283 382 aa12.99□□□□□ -0.33
SEC24D-208ENST00000506622 SFTPDP35247 375 aa12.99□□□□□ -0.33
SEC24D-208ENST00000506622 RNPS1Q15287 305 aaKnown RBP12.99□□□□□ -0.33
SEC24D-208ENST00000506622 GALNTL6Q49A17 601 aa12.99□□□□□ -0.33
SEC24D-208ENST00000506622 CCNJQ5T5M9 372 aa12.99□□□□□ -0.33
SEC24D-208ENST00000506622 LRIG3Q6UXM1 1119 aa12.99□□□□□ -0.33
SEC24D-208ENST00000506622 MTERF4Q7Z6M4 381 aaKnown RBP12.99□□□□□ -0.33
SEC24D-208ENST00000506622 C10orf107Q8IVU9 208 aa12.99□□□□□ -0.33
SEC24D-208ENST00000506622 ZNF527Q8NB42 609 aa12.99□□□□□ -0.33
SEC24D-208ENST00000506622 LRRN4CLQ8ND94 238 aa12.99□□□□□ -0.33
SEC24D-208ENST00000506622 KIF18AQ8NI77 898 aa12.99□□□□□ -0.33
SEC24D-208ENST00000506622 PHOSPHO1Q8TCT1 267 aa12.99□□□□□ -0.33
SEC24D-208ENST00000506622 AKAP1Q92667 903 aaKnown RBP eCLIP12.99□□□□□ -0.33
SEC24D-208ENST00000506622 CPNE4Q96A23 557 aaPredicted RBP12.99□□□□□ -0.33
SEC24D-208ENST00000506622 OTUB1Q96FW1 271 aaPredicted RBP12.99□□□□□ -0.33
SEC24D-208ENST00000506622 TMEM204Q9BSN7 226 aa12.99□□□□□ -0.33
SEC24D-208ENST00000506622 C12orf65Q9H3J6 166 aaKnown RBP12.99□□□□□ -0.33
SEC24D-208ENST00000506622 NGBQ9NPG2 151 aa12.99□□□□□ -0.33
SEC24D-208ENST00000506622 ZCCHC3Q9NUD5 404 aaKnown RBP12.99□□□□□ -0.33
SEC24D-208ENST00000506622 LAMP3Q9UQV4 416 aa12.99□□□□□ -0.33
SEC24D-208ENST00000506622 FBN1P35555 2871 aaKnown RBP12.98□□□□□ -0.33
SEC24D-208ENST00000506622 SMIM23A6NLE4 172 aa12.98□□□□□ -0.33
SEC24D-208ENST00000506622 TMEM114B3SHH9 223 aa12.98□□□□□ -0.33
SEC24D-208ENST00000506622 H3BNH8 94 aa12.98□□□□□ -0.33
SEC24D-208ENST00000506622 LSM1O15116 133 aaKnown RBP12.98□□□□□ -0.33
SEC24D-208ENST00000506622 HMGN2P05204 90 aaKnown RBP12.98□□□□□ -0.33
SEC24D-208ENST00000506622 BCKDHAP12694 445 aa12.98□□□□□ -0.33
SEC24D-208ENST00000506622 KRT4P19013 534 aa12.98□□□□□ -0.33
SEC24D-208ENST00000506622 EFNA1P20827 205 aaPredicted RBP12.98□□□□□ -0.33
SEC24D-208ENST00000506622 ELK4P28324 431 aa12.98□□□□□ -0.33
SEC24D-208ENST00000506622 HPCAL1P37235 193 aa12.98□□□□□ -0.33
SEC24D-208ENST00000506622 LASP1Q14847 261 aaKnown RBP12.98□□□□□ -0.33
SEC24D-208ENST00000506622 MLC1Q15049 377 aa12.98□□□□□ -0.33
SEC24D-208ENST00000506622 CD226Q15762 336 aa12.98□□□□□ -0.33
SEC24D-208ENST00000506622 ZNF239Q16600 458 aaKnown RBP12.98□□□□□ -0.33
SEC24D-208ENST00000506622 RNF165Q6ZSG1 346 aa12.98□□□□□ -0.33
SEC24D-208ENST00000506622 DDIASQ8IXT1 998 aa12.98□□□□□ -0.33
SEC24D-208ENST00000506622 ABHD3Q8WU67 409 aa12.98□□□□□ -0.33
SEC24D-208ENST00000506622 CDS1Q92903 461 aa12.98□□□□□ -0.33
SEC24D-208ENST00000506622 S100PBPQ96BU1 408 aa12.98□□□□□ -0.33
SEC24D-208ENST00000506622 FAM120BQ96EK7 910 aaKnown RBP12.98□□□□□ -0.33
SEC24D-208ENST00000506622 STACQ99469 402 aa12.98□□□□□ -0.33
SEC24D-208ENST00000506622 HOXD1Q9GZZ0 328 aa12.98□□□□□ -0.33
SEC24D-208ENST00000506622 PIGUQ9H490 435 aa12.98□□□□□ -0.33
SEC24D-208ENST00000506622 TUBB1Q9H4B7 451 aa12.98□□□□□ -0.33
SEC24D-208ENST00000506622 ESRP2Q9H6T0 727 aaKnown RBP12.98□□□□□ -0.33
SEC24D-208ENST00000506622 PPCSQ9HAB8 311 aa12.98□□□□□ -0.33
SEC24D-208ENST00000506622 DUSP22Q9NRW4 184 aa12.98□□□□□ -0.33
SEC24D-208ENST00000506622 DNAJC15Q9Y5T4 150 aa12.98□□□□□ -0.33
SEC24D-208ENST00000506622 SNX8Q9Y5X2 465 aa12.98□□□□□ -0.33
SEC24D-208ENST00000506622 ALPK2Q86TB3 2170 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 KIAA1324LA8MWY0 1029 aaPredicted RBP12.97□□□□□ -0.33
SEC24D-208ENST00000506622 GTPBP1O00178 669 aaKnown RBP12.97□□□□□ -0.33
SEC24D-208ENST00000506622 ZNF195O14628 629 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 TRIM13O60858 407 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 PRKD3O94806 890 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 SOX30O94993 753 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 SHBGP04278 402 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 IL32P24001 234 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 ADH6P28332 368 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 MAPK1P28482 360 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 RPL3P39023 403 aaKnown RBP12.97□□□□□ -0.33
SEC24D-208ENST00000506622 RPS4XP62701 263 aaKnown RBP12.97□□□□□ -0.33
SEC24D-208ENST00000506622 ZNF117Q03924 483 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 FOXF1Q12946 379 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 KANK2Q63ZY3 851 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 TDRPQ86YL5 185 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 TUSC5Q8IXB3 177 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 FBXO27Q8NI29 283 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 ADAMTS15Q8TE58 950 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 RNF128Q8TEB7 428 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 UBLCP1Q8WVY7 318 aaPredicted RBP12.97□□□□□ -0.33
SEC24D-208ENST00000506622 HSD17B8Q92506 261 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 KLHDC3Q9BQ90 382 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 GATA5Q9BWX5 397 aaPredicted RBP12.97□□□□□ -0.33
SEC24D-208ENST00000506622 GP6Q9HCN6 339 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 GIN1Q9NXP7 522 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 KLHL13Q9P2N7 655 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 RNF115Q9Y4L5 304 aa12.97□□□□□ -0.33
SEC24D-208ENST00000506622 GPC6Q9Y625 555 aaPredicted RBP12.97□□□□□ -0.33
SEC24D-208ENST00000506622 PLCE1Q9P212 2302 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms