RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 BCHEP06276 602 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 CD46P15529 392 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 MEOX1P50221 254 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 HMGA2P52926 109 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 CRYZQ08257 329 aaKnown RBP7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 FLYWCH1Q4VC44 716 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 RPS26P11Q5JNZ5 115 aaPredicted RBP7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 ZNF843Q8N446 348 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 OR2T12Q8NG77 320 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 WDR60Q8WVS4 1066 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 ADOQ96SZ5 270 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 PLA2G3Q9NZ20 509 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 TESQ9UGI8 421 aaKnown RBP7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 OR14I1A6ND48 311 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 EVPLLA8MZ36 301 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 RFPL3SP0C7P2 107 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 PRKCAP17252 672 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 CLDN15P56746 228 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 TRIM25Q14258 630 aaKnown RBP7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 PDZK1Q5T2W1 519 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 TRILQ7L0X0 811 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 SLCO4A1Q96BD0 722 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 PRSS27Q9BQR3 290 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 ANKRD19PQ9H560 264 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 MAN2C1Q9NTJ4 1040 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 ANGPT4Q9Y264 503 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 CFAP46Q8IYW2 2715 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 AIM2O14862 343 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 ZNF682O95780 498 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 ESRRAP11474 423 aaPredicted RBP7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 SOAT1P35610 550 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 SLC6A8P48029 635 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 LHX2P50458 406 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 MERTKQ12866 999 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 SPDYE7PQ495Y7 208 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 BICRALQ6AI39 1079 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 FIGNL1Q6PIW4 674 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 ATG4DQ86TL0 474 aaPredicted RBP7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 ST6GALNAC3Q8NDV1 305 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 SLC9A6Q92581 669 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 BOD1Q96IK1 185 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 YIPF4Q9BSR8 244 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 FBXL2Q9UKC9 423 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 AP4B1Q9Y6B7 739 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 IGF2RP11717 2491 aa7.52□□□□□ -1.21
CDC42SE2-208ENST00000505065 KALRNO60229 2985 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 AQP12BA6NM10 295 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 B2RBV5 119 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 KLRC4-KLRK1H3BQV0 150 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 CXCR6O00574 342 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 ARPC2O15144 300 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 ZNF208O43345 1280 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 ATP6V1B2P21281 511 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 P2RY4P51582 365 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 FHL1Q13642 323 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 DUSP7Q16829 419 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 ATAD3BQ5T9A4 648 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 HLA-DQA1Q5Y7H0 255 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 AQP12AQ8IXF9 295 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 PRR22Q8IZ63 422 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 CLIP4Q8N3C7 705 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 TMEM251Q8N6I4 163 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 OR52P1PQ8NH57 321 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 NR4A3Q92570 626 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 ZNF597Q96LX8 424 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 EQTNQ9NQ60 294 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 A0A0B4J2E0 115 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 A0A1B0GX12 115 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 ZNF264O43296 627 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 KLF4O43474 513 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 TPST1O60507 370 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 UBL4AP11441 157 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 EDN3P14138 238 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 ZNF708P17019 499 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 IL12BP29460 328 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 CRATP43155 626 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 GLIPR1L2Q4G1C9 344 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 EIPR1Q53HC9 387 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 MRPL2Q5T653 305 aaKnown RBP7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 INTS11Q5TA45 600 aaKnown RBP7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 VASNQ6EMK4 673 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 C19orf48Q6RUI8 117 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 IL20RBQ6UXL0 311 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 DNAJC14Q6Y2X3 702 aaPredicted RBP7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 MARCH3Q86UD3 253 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 VRK2Q86Y07 508 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 LACC1Q8IV20 430 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 DEFB107AQ8IZN7 70 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 OR4C15Q8NGM1 316 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 GAL3ST4Q96RP7 486 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 A4GNTQ9UNA3 340 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 SNX13Q9Y5W8 968 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 RAI1Q7Z5J4 1906 aaPredicted RBP7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 FREM3P0C091 2139 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 MAP1BP46821 2468 aaKnown RBP7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 C17orf51A8MQB3 221 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 FFAR1O14842 300 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms