RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 A0A1W2PRQ8 180 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 CBFA2T3O75081 653 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 ARL6IP5O75915 188 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 DNAJB5O75953 348 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 F10P00742 488 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 BMXP51813 675 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 PPP1CAP62136 330 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 CEACAM19Q7Z692 300 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 CRIPAKQ8N1N5 446 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 DUSP19Q8WTR2 217 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 COX14Q96I36 57 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 CDX2Q99626 313 aaPredicted RBP13.13□□□□□ -0.31
TCOF1-207ENST00000504761 RNF121Q9H920 327 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 FOLH1BQ9HBA9 442 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 NTNG1Q9Y2I2 539 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 SCN3AQ9NY46 2000 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 PRAMEF4O60810 478 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 ITGA10O75578 1167 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 CHAF1BQ13112 559 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 MAPK14Q16539 360 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 ALG10Q5BKT4 473 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 PRAMEF20Q5VT98 475 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 PRAMEF9Q5VWM5 478 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 ULK3Q6PHR2 472 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 PAPD4Q6PIY7 484 aaKnown RBP13.13□□□□□ -0.31
TCOF1-207ENST00000504761 PTOV1Q86YD1 416 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 RPRD1BQ9NQG5 326 aaKnown RBP13.13□□□□□ -0.31
TCOF1-207ENST00000504761 SIGLEC6O43699 453 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 CTSVO60911 334 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 FOLR3P41439 243 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 GABARAPL2P60520 117 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 TUBA1BP68363 451 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 NFATC3Q12968 1075 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 DNASE1L3Q13609 305 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 TUBA1AQ71U36 451 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 MAMDC2Q7Z304 686 aaPredicted RBP13.13□□□□□ -0.31
TCOF1-207ENST00000504761 COLQQ9Y215 455 aaPredicted RBP13.13□□□□□ -0.31
TCOF1-207ENST00000504761 FKBP7Q9Y680 259 aa13.13□□□□□ -0.31
TCOF1-207ENST00000504761 TRBV2A0A0J9YWF9 115 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 GALR3O60755 368 aaPredicted RBP13.12□□□□□ -0.31
TCOF1-207ENST00000504761 LDOC1O95751 146 aaPredicted RBP13.12□□□□□ -0.31
TCOF1-207ENST00000504761 P04436 131 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 F13BP05160 661 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 CLRN1P58418 232 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 SRYQ05066 204 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 CBLBQ13191 982 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 FZD2Q14332 565 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 ANKDD1AQ495B1 522 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 GXYLT1Q4G148 440 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 SFTPA2Q8IWL1 248 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 SLC7A13Q8TCU3 470 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 SLC35A4Q96G79 324 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 TUBA1CQ9BQE3 449 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 TAS2R16Q9NYV7 291 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 TSFMP43897 325 aaKnown RBP13.12□□□□□ -0.31
TCOF1-207ENST00000504761 CAPZBP47756 277 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 GALK2Q01415 458 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 ZNF793Q6ZN11 406 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 UBE2Q1Q7Z7E8 422 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 CNOT9Q92600 299 aaKnown RBP13.12□□□□□ -0.31
TCOF1-207ENST00000504761 OMA1Q96E52 524 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 MED20Q9H944 212 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 A0A1W2PQF6 199 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 SH3D21A4FU49 640 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 TVP23AA6NH52 213 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 BRINP1O60477 761 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 RAD1O60671 282 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 EML2O95834 649 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 ENDOUP21128 410 aaKnown RBP13.12□□□□□ -0.31
TCOF1-207ENST00000504761 F8A1P23610 371 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 RBMS1P29558 406 aaKnown RBP13.12□□□□□ -0.31
TCOF1-207ENST00000504761 SRSF5Q13243 272 aaKnown RBP13.12□□□□□ -0.31
TCOF1-207ENST00000504761 P4HA3Q7Z4N8 544 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 RABEPKQ7Z6M1 372 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 ADGRF3Q8IZF5 1079 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 OR4F15Q8NGB8 312 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 TMEM255BQ8WV15 326 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 OR51E2Q9H255 320 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 A4GALTQ9NPC4 353 aa13.12□□□□□ -0.31
TCOF1-207ENST00000504761 KCNE1BA0A087WTH5 132 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 NPIPA2E9PIF3 369 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 NPIPA3F8WFD2 350 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 BCAS1O75363 584 aaPredicted RBP13.11□□□□□ -0.31
TCOF1-207ENST00000504761 ZNF20P17024 532 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 DCDP81605 110 aaKnown RBP13.11□□□□□ -0.31
TCOF1-207ENST00000504761 PLAG1Q6DJT9 500 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 PRSS41Q7RTY9 318 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 MSRB3Q8IXL7 192 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 CAPSLQ8WWF8 208 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 TSLPQ969D9 159 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 UCN3Q969E3 161 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 MROQ9BYG7 248 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 CDH10Q9Y6N8 788 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 IL33O95760 270 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 ELAVL4P26378 380 aaKnown RBP13.11□□□□□ -0.31
TCOF1-207ENST00000504761 SLC5A2P31639 672 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 TLE3Q04726 772 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 MOGQ16653 247 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 FBXO42Q6P3S6 717 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 PAQR7Q86WK9 346 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms