RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 VPS29Q9UBQ0 182 aa13.92□□□□□ -0.18
PDLIM7-210ENST00000503827 NFU1Q9UMS0 254 aa13.92□□□□□ -0.18
PDLIM7-210ENST00000503827 GNG14A0A1W2PPG7 69 aa13.91□□□□□ -0.18
PDLIM7-210ENST00000503827 TMEM89A2RUT3 159 aa13.91□□□□□ -0.18
PDLIM7-210ENST00000503827 M0R1B8 84 aa13.91□□□□□ -0.18
PDLIM7-210ENST00000503827 TP73O15350 636 aa13.91□□□□□ -0.18
PDLIM7-210ENST00000503827 RGS14O43566 566 aa13.91□□□□□ -0.18
PDLIM7-210ENST00000503827 OXSR1O95747 527 aaPredicted RBP13.91□□□□□ -0.18
PDLIM7-210ENST00000503827 ELK4P28324 431 aa13.91□□□□□ -0.18
PDLIM7-210ENST00000503827 GABRA3P34903 492 aa13.91□□□□□ -0.18
PDLIM7-210ENST00000503827 CHRNEQ04844 493 aa13.91□□□□□ -0.18
PDLIM7-210ENST00000503827 TMEM107Q6UX40 140 aa13.91□□□□□ -0.18
PDLIM7-210ENST00000503827 C3orf62Q6ZUJ4 267 aa13.91□□□□□ -0.18
PDLIM7-210ENST00000503827 ZNF433Q8N7K0 673 aaPredicted RBP13.91□□□□□ -0.18
PDLIM7-210ENST00000503827 SEMA6DQ8NFY4 1073 aa13.91□□□□□ -0.18
PDLIM7-210ENST00000503827 PHF21BQ96EK2 531 aa13.91□□□□□ -0.18
PDLIM7-210ENST00000503827 SH3YL1Q96HL8 342 aaPredicted RBP13.91□□□□□ -0.18
PDLIM7-210ENST00000503827 PSD2Q9BQI7 771 aa13.91□□□□□ -0.18
PDLIM7-210ENST00000503827 LMF2Q9BU23 707 aaKnown RBP13.91□□□□□ -0.18
PDLIM7-210ENST00000503827 CXorf36Q9H7Y0 433 aa13.91□□□□□ -0.18
PDLIM7-210ENST00000503827 FKRPQ9H9S5 495 aa13.91□□□□□ -0.18
PDLIM7-210ENST00000503827 DDX18Q9NVP1 670 aaKnown RBP13.91□□□□□ -0.18
PDLIM7-210ENST00000503827 DMGDHQ9UI17 866 aaKnown RBP13.91□□□□□ -0.18
PDLIM7-210ENST00000503827 PCTPQ9UKL6 214 aa13.91□□□□□ -0.18
PDLIM7-210ENST00000503827 CIB4A0PJX0 185 aa13.9□□□□□ -0.18
PDLIM7-210ENST00000503827 TTC36A6NLP5 189 aa13.9□□□□□ -0.18
PDLIM7-210ENST00000503827 UPK1AO00322 258 aa13.9□□□□□ -0.18
PDLIM7-210ENST00000503827 PCDH7O60245 1069 aa13.9□□□□□ -0.18
PDLIM7-210ENST00000503827 RAD51DO75771 328 aa13.9□□□□□ -0.18
PDLIM7-210ENST00000503827 KLHL2O95198 593 aa13.9□□□□□ -0.18
PDLIM7-210ENST00000503827 IGKV1D-16P01601 117 aa13.9□□□□□ -0.18
PDLIM7-210ENST00000503827 JUNP05412 331 aaKnown RBP13.9□□□□□ -0.18
PDLIM7-210ENST00000503827 C2P06681 752 aa13.9□□□□□ -0.18
PDLIM7-210ENST00000503827 ENPP1P22413 925 aa13.9□□□□□ -0.18
PDLIM7-210ENST00000503827 NCBP2P52298 156 aaKnown RBP eCLIP13.9□□□□□ -0.182e-6■□□□□ 8.3
PDLIM7-210ENST00000503827 SLC29A2Q14542 456 aa13.9□□□□□ -0.18
PDLIM7-210ENST00000503827 KLHL7Q8IXQ5 586 aa13.9□□□□□ -0.18
PDLIM7-210ENST00000503827 ZNF100Q8IYN0 542 aa13.9□□□□□ -0.18
PDLIM7-210ENST00000503827 OR4C3Q8NH37 302 aa13.9□□□□□ -0.18
PDLIM7-210ENST00000503827 NSUN5Q96P11 429 aaKnown RBP13.9□□□□□ -0.18
PDLIM7-210ENST00000503827 SORCS2Q96PQ0 1159 aa13.9□□□□□ -0.18
PDLIM7-210ENST00000503827 BPESC1Q9GZL8 116 aa13.9□□□□□ -0.18
PDLIM7-210ENST00000503827 SLC25A15Q9Y619 301 aa13.9□□□□□ -0.18
PDLIM7-210ENST00000503827 IGHV3-15A0A0B4J1V0 119 aa13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 A0A0G2JK05 382 aa13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 GXYLT2A0PJZ3 443 aa13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 MYO1GB0I1T2 1018 aa13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 FAM157AC9JC47 383 aa13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 PSMG1O95456 288 aa13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 NGFRP08138 427 aa13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 LINGO3P0C6S8 592 aa13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 HPGDP15428 266 aa13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 PCMT1P22061 227 aa13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 PHC1P78364 1004 aa13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 RASGEF1BQ0VAM2 473 aa13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 FOXF1Q12946 379 aa13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 TMEM176BQ3YBM2 270 aaPredicted RBP13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 GLE1Q53GS7 698 aaKnown RBP13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 MISPQ8IVT2 679 aa13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 OR2L13Q8N349 312 aa13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 LINC01356Q8N9X3 169 aa13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 B4GALNT2Q8NHY0 566 aa13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 C16orf78Q8WTQ4 265 aa13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 FBXO17Q96EF6 278 aa13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 NTMQ9P121 344 aa13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 ING1Q9UK53 422 aaPredicted RBP13.89□□□□□ -0.19
PDLIM7-210ENST00000503827 A0A1W2PR80 420 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 LRP5LA4QPB2 252 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 CCT8L1PA6NM43 557 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 C9JVG2 144 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 STX16-NPEPL1H3BU86 382 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 ZNF195O14628 629 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 STX16O14662 325 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 OTCP00480 354 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 GSTA2P09210 222 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 HSD3B1P14060 373 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 EDNRAP25101 427 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 HSD3B2P26439 372 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 CHN2P52757 468 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 DEFA6Q01524 100 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 SWI5Q1ZZU3 235 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 TECRLQ5HYJ1 363 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 PRR31Q5SQ13 230 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 RINLQ6ZS11 566 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 MMGT1Q8N4V1 131 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 ATP6V1C2Q8NEY4 427 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 GPR151Q8TDV0 419 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 ZFP90Q8TF47 636 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 PIK3R3Q92569 461 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 ZNF775Q96BV0 537 aaPredicted RBP13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 ZNF300Q96RE9 604 aaPredicted RBP13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 VRK1Q99986 396 aaPredicted RBP13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 METTL17Q9H7H0 456 aaPredicted RBP13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 COQ10BQ9H8M1 238 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 TMCO1Q9UM00 188 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 PPP2R2CQ9Y2T4 447 aa13.88□□□□□ -0.19
PDLIM7-210ENST00000503827 A0A096LPK6 155 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 NPIPA5A0A0B4J1W7 369 aa13.87□□□□□ -0.19
PDLIM7-210ENST00000503827 SERINC4A6NH21 518 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms