RNA–Protein interactions for RNA: ENST00000503495.5

DDR1-249, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-249ENST00000503495 MTERF3Q96E29 417 aa13.38□□□□□ -0.27
DDR1-249ENST00000503495 SH3YL1Q96HL8 342 aaPredicted RBP13.38□□□□□ -0.27
DDR1-249ENST00000503495 REXO5Q96IC2 774 aaKnown RBP13.38□□□□□ -0.27
DDR1-249ENST00000503495 MS4A4EQ96PG1 132 aa13.38□□□□□ -0.27
DDR1-249ENST00000503495 KLHDC3Q9BQ90 382 aa13.38□□□□□ -0.27
DDR1-249ENST00000503495 ESRP2Q9H6T0 727 aaKnown RBP13.38□□□□□ -0.27
DDR1-249ENST00000503495 TMEM185BQ9H7F4 350 aa13.38□□□□□ -0.27
DDR1-249ENST00000503495 LRTM1Q9HBL6 345 aa13.38□□□□□ -0.27
DDR1-249ENST00000503495 NGBQ9NPG2 151 aa13.38□□□□□ -0.27
DDR1-249ENST00000503495 GIN1Q9NXP7 522 aa13.38□□□□□ -0.27
DDR1-249ENST00000503495 TBK1Q9UHD2 729 aa13.38□□□□□ -0.27
DDR1-249ENST00000503495 RNF115Q9Y4L5 304 aa13.38□□□□□ -0.27
DDR1-249ENST00000503495 SNX8Q9Y5X2 465 aa13.38□□□□□ -0.27
DDR1-249ENST00000503495 A0A1W2PPM1 405 aa13.37□□□□□ -0.27
DDR1-249ENST00000503495 RGS14O43566 566 aa13.37□□□□□ -0.27
DDR1-249ENST00000503495 EFNA2O43921 213 aa13.37□□□□□ -0.27
DDR1-249ENST00000503495 THBS1P07996 1170 aa13.37□□□□□ -0.27
DDR1-249ENST00000503495 SDC1P18827 310 aa13.37□□□□□ -0.27
DDR1-249ENST00000503495 MLC1Q15049 377 aa13.37□□□□□ -0.27
DDR1-249ENST00000503495 CD226Q15762 336 aa13.37□□□□□ -0.27
DDR1-249ENST00000503495 RFTN2Q52LD8 501 aaPredicted RBP13.37□□□□□ -0.27
DDR1-249ENST00000503495 NUFIP2Q7Z417 695 aaKnown RBP13.37□□□□□ -0.27
DDR1-249ENST00000503495 HOMEZQ8IX15 550 aa13.37□□□□□ -0.27
DDR1-249ENST00000503495 TUSC5Q8IXB3 177 aa13.37□□□□□ -0.27
DDR1-249ENST00000503495 ABHD3Q8WU67 409 aa13.37□□□□□ -0.27
DDR1-249ENST00000503495 SMAP2Q8WU79 429 aaPredicted RBP13.37□□□□□ -0.27
DDR1-249ENST00000503495 C16orf58Q96GQ5 468 aa13.37□□□□□ -0.27
DDR1-249ENST00000503495 C16orf45Q96MC5 204 aaPredicted RBP13.37□□□□□ -0.27
DDR1-249ENST00000503495 DUSP22Q9NRW4 184 aa13.37□□□□□ -0.27
DDR1-249ENST00000503495 OXSMQ9NWU1 459 aa13.37□□□□□ -0.27
DDR1-249ENST00000503495 SH3BP4Q9P0V3 963 aa13.37□□□□□ -0.27
DDR1-249ENST00000503495 KLHL13Q9P2N7 655 aa13.37□□□□□ -0.27
DDR1-249ENST00000503495 ANK3Q12955 4377 aaKnown RBP13.37□□□□□ -0.27
DDR1-249ENST00000503495 GJE1A6NN92 205 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 RNF223E7ERA6 249 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 ZNF195O14628 629 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 PLIN3O60664 434 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 PRKD3O94806 890 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 CD3EP07766 207 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 SOD3P08294 240 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 SHC1P29353 583 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 CCT5P48643 541 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 PRIM2P49643 509 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 P2RX1P51575 399 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 POU6F2P78424 691 aaPredicted RBP13.36□□□□□ -0.27
DDR1-249ENST00000503495 DMTNQ08495 405 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 VEZF1Q14119 521 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 P2RY6Q15077 328 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 TAB1Q15750 504 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 ZNF672Q499Z4 452 aaPredicted RBP13.36□□□□□ -0.27
DDR1-249ENST00000503495 KLHL26Q53HC5 615 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 CCNJQ5T5M9 372 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 CLEC6AQ6EIG7 209 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 SZRD1Q7Z422 152 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 SLC43A2Q8N370 569 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 FBXO30Q8TB52 745 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 TSSK3Q96PN8 268 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 STACQ99469 402 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 BTBD2Q9BX70 525 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 SRXN1Q9BYN0 137 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 REG4Q9BYZ8 158 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 TXLNGYQ9BZA5 131 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 GRIP2Q9C0E4 1043 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 PIGUQ9H490 435 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 BAIAP2L1Q9UHR4 511 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 ICAM5Q9UMF0 924 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 TMED5Q9Y3A6 229 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 PTGDR2Q9Y5Y4 395 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 ACTL7BQ9Y614 415 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 GPC6Q9Y625 555 aaPredicted RBP13.36□□□□□ -0.27
DDR1-249ENST00000503495 FREM1Q5H8C1 2179 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 COL6A5A8TX70 2615 aa13.36□□□□□ -0.27
DDR1-249ENST00000503495 AKAP10O43572 662 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 ADAP00813 363 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 HMGN2P05204 90 aaKnown RBP13.35□□□□□ -0.27
DDR1-249ENST00000503495 YES1P07947 543 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 NEFHP12036 1026 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 CPA3P15088 417 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 IL32P24001 234 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 SFTPDP35247 375 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 ZNF117Q03924 483 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 FOXF1Q12946 379 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 ITGADQ13349 1161 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 TSC22D1Q15714 1073 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 CBLN3Q6UW01 205 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 DNM1P46Q6ZS02 220 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 FCRLAQ7L513 359 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 IFT20Q8IY31 132 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 CEP112Q8N8E3 955 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 COX18Q8N8Q8 333 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 OR2T11Q8NH01 316 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 FBXO27Q8NI29 283 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 PIWIL2Q8TC59 973 aaKnown RBP13.35□□□□□ -0.27
DDR1-249ENST00000503495 PHOSPHO1Q8TCT1 267 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 FAM120BQ96EK7 910 aaKnown RBP13.35□□□□□ -0.27
DDR1-249ENST00000503495 HOXD1Q9GZZ0 328 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 SLCO5A1Q9H2Y9 848 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 TUBB1Q9H4B7 451 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 L2HGDHQ9H9P8 463 aa13.35□□□□□ -0.27
DDR1-249ENST00000503495 SIRT3Q9NTG7 399 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms