RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 CPLX4Q7Z7G2 160 aa9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 ZNF440Q8IYI8 595 aa9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 BHLHE22Q8NFJ8 381 aaPredicted RBP9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 OR5W2Q8NH69 310 aa9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 B4GALNT2Q8NHY0 566 aa9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 BBS10Q8TAM1 723 aa9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 PRR7Q8TB68 274 aa9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 SSC4DQ8WTU2 575 aa9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 RAB8BQ92930 207 aa9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 ABTB1Q969K4 478 aaPredicted RBP9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 OTUB1Q96FW1 271 aaPredicted RBP9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 TREX2Q9BQ50 279 aaPredicted RBP9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 CCDC106Q9BWC9 280 aa9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 TSPAN10Q9H1Z9 355 aaPredicted RBP9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 DSN1Q9H410 356 aa9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 KAT8Q9H7Z6 458 aaKnown RBP9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 SPRR3Q9UBC9 169 aa9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 ERRFI1Q9UJM3 462 aaPredicted RBP9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 MKLN1Q9UL63 735 aa9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 OSGIN2Q9Y236 505 aa9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 IFT52Q9Y366 437 aa9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 HRH3Q9Y5N1 445 aa9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 GPC6Q9Y625 555 aaPredicted RBP9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 AP4B1Q9Y6B7 739 aa9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 NCKAP5O14513 1909 aa9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 GCN1Q92616 2671 aaKnown RBP9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 NCOA6Q14686 2063 aaPredicted RBP9.73□□□□□ -0.85
UBE2D3-212ENST00000502563 USP9XQ93008 2570 aaPredicted RBP9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 C15orf38-AP3S2A0A0A6YYH1 394 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 CD8B2A6NJW9 211 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 FXYD1O00168 92 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 TRAPPC6AO75865 159 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 FAM107AO95990 144 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 LINGO3P0C6S8 592 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 NR2F1P10589 423 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 UBL4AP11441 157 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 PEPDP12955 493 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 ETFAP13804 333 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 ZNF708P17019 499 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 BMP7P18075 431 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 PSMA4P25789 261 aaKnown RBP9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 ACVR2AP27037 513 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 TIMP3P35625 211 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 SLC6A8P48029 635 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 LHX2P50458 406 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 KCNJ10P78508 379 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 HSF1Q00613 529 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 ZNF117Q03924 483 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 SKP2Q13309 424 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 CBFBQ13951 182 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 GPR68Q15743 365 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 SYPL1Q16563 259 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 C3AR1Q16581 482 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 PLPPR5Q32ZL2 321 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 GPAT3Q53EU6 434 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 EIPR1Q53HC9 387 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 PDZK1Q5T2W1 519 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 ARPINQ7Z6K5 226 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 CD163Q86VB7 1156 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 PEX5LQ8IYB4 626 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 ANKFN1Q8N957 763 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 OR14L1PQ8NHC6 308 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 PHOSPHO1Q8TCT1 267 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 ST8SIA1Q92185 356 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 CMTM5Q96DZ9 223 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 AURKBQ96GD4 344 aaPredicted RBP9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 MRGPRX4Q96LA9 322 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 ZFP3Q96NJ6 502 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 ELAC2Q9BQ52 826 aaKnown RBP9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 UGT2B28Q9BY64 529 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 SLC6A15Q9H2J7 730 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 ARMC7Q9H6L4 198 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 RUBCNLQ9H714 662 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 CALHM2Q9HA72 323 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 GID8Q9NWU2 228 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 PAQR5Q9NXK6 330 aaPredicted RBP9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 DKKL1Q9UK85 242 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 ARL2BPQ9Y2Y0 163 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 FLNCQ14315 2725 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 LRRK2Q5S007 2527 aa9.72□□□□□ -0.85
UBE2D3-212ENST00000502563 TRGV8A0A0C4DH27 118 aa9.71□□□□□ -0.86
UBE2D3-212ENST00000502563 CDHR4A6H8M9 788 aa9.71□□□□□ -0.86
UBE2D3-212ENST00000502563 NPIPA2E9PIF3 369 aa9.71□□□□□ -0.86
UBE2D3-212ENST00000502563 NPIPA3F8WFD2 350 aa9.71□□□□□ -0.86
UBE2D3-212ENST00000502563 NDUFAB1O14561 156 aa9.71□□□□□ -0.86
UBE2D3-212ENST00000502563 LRRTM2O43300 516 aa9.71□□□□□ -0.86
UBE2D3-212ENST00000502563 HCRTR2O43614 444 aa9.71□□□□□ -0.86
UBE2D3-212ENST00000502563 SEMA7AO75326 666 aa9.71□□□□□ -0.86
UBE2D3-212ENST00000502563 DCTN3O75935 186 aa9.71□□□□□ -0.86
UBE2D3-212ENST00000502563 PGM3O95394 542 aa9.71□□□□□ -0.86
UBE2D3-212ENST00000502563 EPPINO95925 133 aa9.71□□□□□ -0.86
UBE2D3-212ENST00000502563 CSTAP01040 98 aa9.71□□□□□ -0.86
UBE2D3-212ENST00000502563 C1QCP02747 245 aa9.71□□□□□ -0.86
UBE2D3-212ENST00000502563 TPOP07202 933 aa9.71□□□□□ -0.86
UBE2D3-212ENST00000502563 CD1EP15812 388 aa9.71□□□□□ -0.86
UBE2D3-212ENST00000502563 ZNF41P51814 821 aaPredicted RBP9.71□□□□□ -0.86
UBE2D3-212ENST00000502563 CLDN18P56856 261 aa9.71□□□□□ -0.86
UBE2D3-212ENST00000502563 PCBP3P57721 371 aaKnown RBP9.71□□□□□ -0.86
UBE2D3-212ENST00000502563 EEFSECP57772 596 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms