RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	PTDSS1	P48651	473 aa	Known RBP	11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	RNF144A	P50876	292 aa	Predicted RBP	11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	SSR4	P51571	173 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	IST1	P53990	364 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	RGS8	P57771	180 aa	Predicted RBP	11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	SESN3	P58005	492 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	CDC20	Q12834	499 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	TRIP10	Q15642	601 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	MEP1A	Q16819	746 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	ACER2	Q5QJU3	275 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	B3GNTL1	Q67FW5	361 aa	Predicted RBP	11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	TMEM179B	Q7Z7N9	219 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	SIRT6	Q8N6T7	355 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	ZNF614	Q8N883	585 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	OR10G3	Q8NGC4	313 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	GATA6	Q92908	595 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	PRRC1	Q96M27	445 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	SECISBP2	Q96T21	854 aa	Known RBP	11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	POLR2J2	Q9GZM3	115 aa	Known RBP	11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	LHPP	Q9H008	270 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	POLR2J3	Q9H1A7	115 aa	Known RBP	11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	ARMC7	Q9H6L4	198 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	MAN2C1	Q9NTJ4	1040 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	ACER3	Q9NUN7	267 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	TES	Q9UGI8	421 aa	Known RBP	11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	SLC13A4	Q9UKG4	626 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	LYVE1	Q9Y5Y7	322 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	AKAP13	Q12802	2813 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	IGLV3-32	A0A0A0MS00	114 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394		B4DXG7	233 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	ADAMDEC1	O15204	470 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	PEX1	O43933	1283 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	EIF4E2	O60573	245 aa	Known RBP	11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	THY1	P04216	161 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	GKN3P	P0CG01	181 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	UBL4A	P11441	157 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	ZNF26	P17031	533 aa	Predicted RBP	11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	ENDOU	P21128	410 aa	Known RBP	11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	FPR1	P21462	350 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	RRM2	P31350	389 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	YAP1	P46937	504 aa	Known RBP	11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	RRAD	P55042	308 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	HOXC5	Q00444	222 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	EPS8	Q12929	822 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	GK3P	Q14409	553 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	NDUFAF6	Q330K2	333 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	ZNF468	Q5VIY5	522 aa	Predicted RBP	11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	LPCAT4	Q643R3	524 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	DEF8	Q6ZN54	512 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	ZNF550	Q7Z398	422 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	MARCH3	Q86UD3	253 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	ZNF227	Q86WZ6	799 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	GPALPP1	Q8IXQ4	340 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	ZNF440	Q8IYI8	595 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	OFCC1	Q8IZS5	231 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	OR5K1	Q8NHB7	308 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	PAQR8	Q8TEZ7	354 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	ASB15	Q8WXK1	588 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	NR4A3	Q92570	626 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	TMCO6	Q96DC7	493 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	NRBF2	Q96F24	287 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	FRMD6	Q96NE9	622 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	CCNL2	Q96S94	520 aa	Predicted RBP	11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	EPYC	Q99645	322 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	MCHR1	Q99705	422 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	KLHDC3	Q9BQ90	382 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	LAT2	Q9GZY6	243 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	CNOT11	Q9UKZ1	510 aa	Known RBP	11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	OAZ3	Q9UMX2	235 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	POLH	Q9Y253	713 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	NTNG1	Q9Y2I2	539 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	HRH3	Q9Y5N1	445 aa		11.11	□□□□□ -0.63
MATR3-231	ENST00000502394	APC2	O95996	2303 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394		A0A1W2PRQ8	180 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	ARGFX	A6NJG6	315 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	SAC3D1	A6NKF1	404 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	C17orf51	A8MQB3	221 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	FAAH	O00519	579 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	CDK2AP1	O14519	115 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	ZNF264	O43296	627 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	OR5F1	O95221	314 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	ANGPTL1	O95841	491 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	UBTFL6	P0CB48	400 aa	Predicted RBP	11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	PRKAR1A	P10644	381 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	HPGD	P15428	266 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	DNAJA1	P31689	397 aa	Known RBP	11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	CASP3	P42574	277 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	SPIB	Q01892	262 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	ZNF117	Q03924	483 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	PPP1R8	Q12972	351 aa	Known RBP	11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	PIN1	Q13526	163 aa	Predicted RBP	11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	DGCR6	Q14129	220 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	ENTPD8	Q5MY95	495 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	SHQ1	Q6PI26	577 aa	Known RBP	11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	TBPL2	Q6SJ96	375 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	CBLN3	Q6UW01	205 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	MISP	Q8IVT2	679 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	BEST3	Q8N1M1	668 aa		11.1	□□□□□ -0.63
MATR3-231	ENST00000502394	GALNT16	Q8N428	558 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms