RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 KLHL9Q9P2J3 617 aa10.31□□□□□ -0.76
CDK9-205ENST00000498339 C19orf53Q9UNZ5 99 aaPredicted RBP10.31□□□□□ -0.76
CDK9-205ENST00000498339 MGAT4BQ9UQ53 548 aa10.31□□□□□ -0.76
CDK9-205ENST00000498339 ATP23Q9Y6H3 246 aa10.31□□□□□ -0.76
CDK9-205ENST00000498339 CIB4A0PJX0 185 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 ZNF814B7Z6K7 855 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 ALG1L2C9J202 215 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 M0R1B8 84 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 UPK1AO00322 258 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 MANBAO00462 879 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 SCDO00767 359 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 RAD51DO75771 328 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 TGFAP01135 160 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 IGKV1D-16P01601 117 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 KRT6AP02538 564 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 KRT6BP04259 564 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 RPS17P08708 135 aaKnown RBP10.3□□□□□ -0.76
CDK9-205ENST00000498339 RBP1P09455 135 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 HSD3B1P14060 373 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 CHN1P15882 459 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 HSD3B2P26439 372 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 HMOX2P30519 316 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 SLC7A1P30825 629 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 PAFAH1B1P43034 410 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 KRT6CP48668 564 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 RAE1P78406 368 aaKnown RBP10.3□□□□□ -0.76
CDK9-205ENST00000498339 CHRNEQ04844 493 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 CHRNB3Q05901 458 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 C2orf80Q0P641 193 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 SLC29A2Q14542 456 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 CR1LQ2VPA4 569 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 SSX8Q7RTT4 187 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 ZNF100Q8IYN0 542 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 PLD6Q8N2A8 252 aaKnown RBP10.3□□□□□ -0.76
CDK9-205ENST00000498339 OR2L13Q8N349 312 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 SLC43A2Q8N370 569 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.3□□□□□ -0.76
CDK9-205ENST00000498339 B4GALNT2Q8NHY0 566 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 FBXO30Q8TB52 745 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 POC1BQ8TC44 478 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 APIPQ96GX9 242 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 GPR78Q96P69 363 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 LMF2Q9BU23 707 aaKnown RBP10.3□□□□□ -0.76
CDK9-205ENST00000498339 SHCBP1LQ9BZQ2 653 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 GP6Q9HCN6 339 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 PMF1-BGLAPU3KQ54 211 aa10.3□□□□□ -0.76
CDK9-205ENST00000498339 ARFGEF3Q5TH69 2177 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 MYO1GB0I1T2 1018 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 C9JVG2 144 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 PPP6CO00743 305 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 KCNAB3O43448 404 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 ANXA4P09525 319 aaPredicted RBP10.29□□□□□ -0.76
CDK9-205ENST00000498339 DDCP20711 480 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 IGHV1-2P23083 117 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 PTAFRP25105 342 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 PSMA4P25789 261 aaKnown RBP10.29□□□□□ -0.76
CDK9-205ENST00000498339 ELK4P28324 431 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 GPC1P35052 558 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 EIF1P41567 113 aaKnown RBP10.29□□□□□ -0.76
CDK9-205ENST00000498339 NR4A2P43354 598 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 OR3A2P47893 321 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 PRIM2P49643 509 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 PRKAG1P54619 331 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 MANFP55145 182 aaKnown RBP10.29□□□□□ -0.76
CDK9-205ENST00000498339 ACTG1P63261 375 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 ZNF763Q0D2J5 394 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 HSPB3Q12988 150 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 TMEM176BQ3YBM2 270 aaPredicted RBP10.29□□□□□ -0.76
CDK9-205ENST00000498339 VPS26BQ4G0F5 336 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 GLE1Q53GS7 698 aaKnown RBP10.29□□□□□ -0.76
CDK9-205ENST00000498339 SPDYAQ5MJ70 313 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 B3GLCTQ6Y288 498 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 MISPQ8IVT2 679 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 UBE2J2Q8N2K1 259 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 OR4C3Q8NH37 302 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 ACTRT2Q8TDY3 377 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 ZNF483Q8TF39 744 aaPredicted RBP10.29□□□□□ -0.76
CDK9-205ENST00000498339 ZFP90Q8TF47 636 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 ZNF775Q96BV0 537 aaPredicted RBP10.29□□□□□ -0.76
CDK9-205ENST00000498339 ACPTQ9BZG2 426 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 GLIPR2Q9H4G4 154 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 MYNNQ9NPC7 610 aa10.29□□□□□ -0.76
CDK9-205ENST00000498339 A0A1W2PR80 420 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 OR5H1A6NKK0 313 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 CCT8L1PA6NM43 557 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 ULK1O75385 1050 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 PSMG1O95456 288 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 COX5AP20674 150 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 ENPP1P22413 925 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 CD40P25942 277 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 MAGEA4P43358 317 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 GSTM5P46439 218 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 RASGEF1BQ0VAM2 473 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 RASA2Q15283 850 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 TSNAXIP1Q2TAA8 658 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 ARL13AQ5H913 290 aaPredicted RBP10.28□□□□□ -0.76
CDK9-205ENST00000498339 TEX35Q5T0J7 233 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 ZNF544Q6NX49 715 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 P2RY8Q86VZ1 359 aa10.28□□□□□ -0.76
CDK9-205ENST00000498339 FAM110BQ8TC76 370 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms