RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 PROK2Q9HC23 129 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 SDHAF3Q9NRP4 125 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 RLIMQ9NVW2 624 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 DNAJB12Q9NXW2 375 aaKnown RBP12.39□□□□□ -0.43
CPNE1-227ENST00000498056 TUBA8Q9NY65 449 aaPredicted RBP12.39□□□□□ -0.43
CPNE1-227ENST00000498056 ACTR3BQ9P1U1 418 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 B4GALT7Q9UBV7 327 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 RPS6KA6Q9UK32 745 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 ZNF232Q9UNY5 417 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 LHX6Q9UPM6 363 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 CARD8Q9Y2G2 431 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 DNAJC13O75165 2243 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 SVILO95425 2214 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 ZNF407Q9C0G0 2248 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 BOD1L1Q8NFC6 3051 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 CDHR4A6H8M9 788 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 ANKRD33BA6NCL7 494 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 M0R3H8 397 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 ACOT7O00154 380 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 ZNF264O43296 627 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 SUV39H1O43463 412 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 FRS3O43559 492 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 RRP9O43818 475 aaKnown RBP12.38□□□□□ -0.43
CPNE1-227ENST00000498056 TPST1O60507 370 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 SFTPCP11686 197 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 CD247P20963 164 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 TCEA1P23193 301 aaKnown RBP12.38□□□□□ -0.43
CPNE1-227ENST00000498056 GDF1P27539 372 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 ERFP50548 548 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 RGS8P57771 180 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-227ENST00000498056 PLAURQ03405 335 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 C17orf67Q0P5P2 114 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 SKP2Q13309 424 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 TOMM20Q15388 145 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 C1orf146Q5VVC0 180 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 LCN8Q6JVE9 175 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 DHRS4L2Q6PKH6 230 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-227ENST00000498056 COMTD1Q86VU5 262 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 SPPL2CQ8IUH8 684 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 CMIPQ8IY22 773 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 BHLHE22Q8NFJ8 381 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-227ENST00000498056 GPR32P1Q8NGA4 272 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 OR10Q1Q8NGQ4 319 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 OR1J4Q8NGS1 313 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 B4GALNT2Q8NHY0 566 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 LZICQ8WZA0 190 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 CNOT9Q92600 299 aaKnown RBP12.38□□□□□ -0.43
CPNE1-227ENST00000498056 UTP4Q969X6 686 aaKnown RBP12.38□□□□□ -0.43
CPNE1-227ENST00000498056 PNPLA2Q96AD5 504 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 HSH2DQ96JZ2 352 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 TTTY12Q9BZ98 90 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 KLHL28Q9NXS3 571 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 MED11Q9P086 117 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 DKKL1Q9UK85 242 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 SAMD4AQ9UPU9 718 aaKnown RBP12.38□□□□□ -0.43
CPNE1-227ENST00000498056 POMPQ9Y244 141 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 BSNQ9UPA5 3926 aa12.38□□□□□ -0.43
CPNE1-227ENST00000498056 ATRXP46100 2492 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 TLN1Q9Y490 2541 aaKnown RBP12.37□□□□□ -0.43
CPNE1-227ENST00000498056 ADAM10O14672 748 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 CDC40O60508 579 aaKnown RBP eCLIP12.37□□□□□ -0.43
CPNE1-227ENST00000498056 TRIM3O75382 744 aaPredicted RBP12.37□□□□□ -0.43
CPNE1-227ENST00000498056 RASAL1O95294 804 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 FESP07332 822 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 GKN3PP0CG01 181 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 ZNF24P17028 368 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 TNFRSF1BP20333 461 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 ELAVL4P26378 380 aaKnown RBP12.37□□□□□ -0.43
CPNE1-227ENST00000498056 RYKP34925 604 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 ZNF41P51814 821 aaPredicted RBP12.37□□□□□ -0.43
CPNE1-227ENST00000498056 MS4A2Q01362 244 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 INAQ16352 499 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 PGM2L1Q6PCE3 622 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 CBLN3Q6UW01 205 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 PCSK4Q6UW60 755 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 CBLL1Q75N03 491 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 VTCN1Q7Z7D3 282 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 PLCZ1Q86YW0 608 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 CLIP4Q8N3C7 705 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 FAM86B1Q8N7N1 296 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 TEX19Q8NA77 164 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 FAM71CQ8NEG0 241 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 TOR1AIP2Q8NFQ8 470 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 OR2M3Q8NG83 312 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 DUSP19Q8WTR2 217 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 SLC39A7Q92504 469 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 FRMD6Q96NE9 622 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 UBL7Q96S82 380 aaPredicted RBP12.37□□□□□ -0.43
CPNE1-227ENST00000498056 DSN1Q9H410 356 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 ZNF703Q9H7S9 590 aaPredicted RBP12.37□□□□□ -0.43
CPNE1-227ENST00000498056 GORASP2Q9H8Y8 452 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 ZFP64Q9NPA5 681 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 FBXL2Q9UKC9 423 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 BAG5Q9UL15 447 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 C15orf41Q9Y2V0 281 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 PCDHGB6Q9Y5F9 930 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 MED12Q93074 2177 aa12.37□□□□□ -0.43
CPNE1-227ENST00000498056 EPG5Q9HCE0 2579 aa12.36□□□□□ -0.43
CPNE1-227ENST00000498056 FAM47E-STBD1D6RA91 191 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms