RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 CORO6Q6QEF8 472 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 WASH2PQ6VEQ5 465 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 RAD9BQ6WBX8 426 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 DPY19L2P2Q6ZN68 376 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 TRMT11Q7Z4G4 463 aaKnown RBP2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 NET1Q7Z628 596 aaPredicted RBP2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 YTHDF3Q7Z739 585 aaKnown RBP2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 MRPL10Q7Z7H8 261 aaKnown RBP2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 SLC22A9Q8IVM8 553 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 ARFGAP2Q8N6H7 521 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 CCDC185Q8N715 623 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 NIPA2Q8N8Q9 360 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 CCDC148Q8NFR7 591 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 OR4C5Q8NGB2 326 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 OR1L3Q8NH93 324 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 RDH11Q8TC12 318 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 ZNF473Q8WTR7 871 aaKnown RBP2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 FCGR1BQ92637 280 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 FBXO32Q969P5 355 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 ADIPOR1Q96A54 375 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 PNPLA2Q96AD5 504 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 BPIFA2Q96DR5 249 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 OXNAD1Q96HP4 312 aaPredicted RBP2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 OR1F2PQ96R84 312 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 SLC39A3Q9BRY0 314 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 ANP32EQ9BTT0 268 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 TMEM43Q9BTV4 400 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 LRRCC1Q9C099 1032 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 NACA2Q9H009 215 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 WWP1Q9H0M0 922 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 ZNF665Q9H7R5 613 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 METTL7AQ9H8H3 244 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 PELI2Q9HAT8 420 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 POLD4Q9HCU8 107 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 RDH8Q9NYR8 311 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 PLEK2Q9NYT0 353 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 NLGN3Q9NZ94 848 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 SPATA7Q9P0W8 599 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 ZNF319Q9P2F9 582 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 TUBGCP4Q9UGJ1 667 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 SMC3Q9UQE7 1217 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 TRAF3IP3Q9Y228 551 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 EIF3LQ9Y262 564 aaKnown RBP2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 MYRFQ9Y2G1 1151 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 GSTK1Q9Y2Q3 226 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 ZNF175Q9Y473 711 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 LRP12Q9Y561 859 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 PTGDR2Q9Y5Y4 395 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 SEC16AO15027 2179 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 WDR19Q8NEZ3 1342 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 LRP4O75096 1905 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 CEP192Q8TEP8 1941 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 CACNA1CQ13936 2221 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 A0A087WUV0 522 aaPredicted RBP2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 A0A0A6YYD4 124 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 IGLV9-49A0A0B4J1Y8 123 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 IGHV4-61A0A0C4DH41 118 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 A0A1B0GVT2 93 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 CCDC162PA2VCL2 907 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 GOLGA8OA6NCC3 632 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 SNTNA6NMZ2 147 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 E5RGE8 158 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 GOLGA8NF8WBI6 632 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 PDLIM1O00151 329 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 ADAM10O14672 748 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 TNFRSF13BO14836 293 aaPredicted RBP2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 KLF11O14901 512 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 MED7O43513 233 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 SMAD6O43541 496 aaKnown RBP2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 SPOPO43791 374 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 RAMP1O60894 148 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 RAMP2O60895 175 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 NEBLO76041 1014 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 LDOC1O95751 146 aaPredicted RBP2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 IGHV4-59P01825 116 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 IGHEP01854 428 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 IGHG4P01861 327 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 LGALS2P05162 132 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 TMEM191BP0C7N4 346 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 DBTP11182 482 aaKnown RBP2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 PAX1P15863 534 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 PAICSP22234 425 aaKnown RBP2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 ZFP36L2P47974 494 aaKnown RBP2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 SLC11A1P49279 550 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 HOXA1P49639 335 aaPredicted RBP2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 CDH4P55283 916 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 TUBA1BP68363 451 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 NCBP1Q09161 790 aaKnown RBP2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 ZP4Q12836 540 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 KIF5AQ12840 1032 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 CNTN1Q12860 1018 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 ART3Q13508 389 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 GANABQ14697 944 aaKnown RBP2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 TAF13Q15543 124 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 TGIF1Q15583 401 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 TRIP10Q15642 601 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 SSX2Q16385 188 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 PARP6Q2NL67 630 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 HKDC1Q2TB90 917 aa2.12□□□□□ -2.07
CKS1BP2-201ENST00000497342 CMPK2Q5EBM0 449 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms