RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 CABYRO75952 493 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 F10P00742 488 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 HNF1AP20823 631 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 IGHV1-2P23083 117 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 PTBP1P26599 531 aaKnown RBP eCLIP4.16□□□□□ -1.74
SSR3-208ENST00000496050 ERVPABLB-1P60509 514 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 ACTR1AP61163 376 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 ST3GAL3Q11203 375 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 GGTA1PQ4G0N0 100 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 ATF7IP2Q5U623 682 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 PVRIGQ6DKI7 326 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 SYT10Q6XYQ8 523 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 C16orf62Q7Z3J2 963 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 CDC20BQ86Y33 519 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 OR2T33Q8NG76 320 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 SLC5A11Q8WWX8 675 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 C12orf66Q96MD2 445 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 TUBGCP2Q9BSJ2 902 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 DPH7Q9BTV6 452 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 ZNF221Q9UK13 617 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 NAALAD2Q9Y3Q0 740 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 ALG6Q9Y672 507 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 GON4LQ3T8J9 2241 aa4.15□□□□□ -1.74
SSR3-208ENST00000496050 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.15□□□□□ -1.75
SSR3-208ENST00000496050 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.15□□□□□ -1.75
SSR3-208ENST00000496050 B4DXG7 233 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 H3BMQ9 156 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 BTN3A3O00478 584 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 MPHOSPH10O00566 681 aaKnown RBP4.15□□□□□ -1.75
SSR3-208ENST00000496050 OR7A17O14581 309 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 BCL2L11O43521 198 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 NUDT21O43809 227 aaKnown RBP4.15□□□□□ -1.75
SSR3-208ENST00000496050 EFNA2O43921 213 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 N4BP1O75113 896 aaKnown RBP4.15□□□□□ -1.75
SSR3-208ENST00000496050 SCRG1O75711 98 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 LRATO95237 230 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 ZNF44P15621 663 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 HPCAL1P37235 193 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 EFNA3P52797 238 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 MRPS11P82912 194 aaKnown RBP4.15□□□□□ -1.75
SSR3-208ENST00000496050 RAB40BQ12829 278 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 MXD4Q14582 209 aaPredicted RBP4.15□□□□□ -1.75
SSR3-208ENST00000496050 LAGE3Q14657 143 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 SLC5A12Q1EHB4 618 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 QRICH1Q2TAL8 776 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 METTL11BQ5VVY1 283 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 BAIAP2L2Q6UXY1 529 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 MTURNQ8N3F0 131 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 FAM133AQ8N9E0 248 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 EMG1Q92979 244 aaKnown RBP4.15□□□□□ -1.75
SSR3-208ENST00000496050 AMDHD1Q96NU7 426 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 RANBP9Q96S59 729 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 CITED1Q99966 193 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 NXF5Q9H1B4 397 aaKnown RBP4.15□□□□□ -1.75
SSR3-208ENST00000496050 LRRC40Q9H9A6 602 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 NANSQ9NR45 359 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 WRAP73Q9P2S5 460 aaPredicted RBP4.15□□□□□ -1.75
SSR3-208ENST00000496050 SLCO1B1Q9Y6L6 691 aa4.15□□□□□ -1.75
SSR3-208ENST00000496050 PNPLA6Q8IY17 1366 aa4.14□□□□□ -1.75
SSR3-208ENST00000496050 SYNJ2BP-COX16A0A087WUM0 186 aa4.14□□□□□ -1.75
SSR3-208ENST00000496050 FCN1O00602 326 aa4.14□□□□□ -1.75
SSR3-208ENST00000496050 RIPK2O43353 540 aa4.14□□□□□ -1.75
SSR3-208ENST00000496050 THY1P04216 161 aa4.14□□□□□ -1.75
SSR3-208ENST00000496050 CXCL6P80162 114 aa4.14□□□□□ -1.75
SSR3-208ENST00000496050 CHIT1Q13231 466 aa4.14□□□□□ -1.75
SSR3-208ENST00000496050 GSG1Q2KHT4 349 aa4.14□□□□□ -1.75
SSR3-208ENST00000496050 PAN3Q58A45 887 aaKnown RBP4.14□□□□□ -1.75
SSR3-208ENST00000496050 SLC25A30Q5SVS4 291 aa4.14□□□□□ -1.75
SSR3-208ENST00000496050 OR5M10Q6IEU7 315 aa4.14□□□□□ -1.75
SSR3-208ENST00000496050 KCNIP4Q6PIL6 250 aa4.14□□□□□ -1.75
SSR3-208ENST00000496050 MOB3BQ86TA1 216 aa4.14□□□□□ -1.75
SSR3-208ENST00000496050 LINC01561Q8N1V8 128 aa4.14□□□□□ -1.75
SSR3-208ENST00000496050 TYMSOSQ8TAI1 123 aa4.14□□□□□ -1.75
SSR3-208ENST00000496050 ZNF606Q8WXB4 792 aa4.14□□□□□ -1.75
SSR3-208ENST00000496050 FAM3CQ92520 227 aa4.14□□□□□ -1.75
SSR3-208ENST00000496050 TGM7Q96PF1 710 aa4.14□□□□□ -1.75
SSR3-208ENST00000496050 PYGO2Q9BRQ0 406 aa4.14□□□□□ -1.75
SSR3-208ENST00000496050 VCX2Q9H322 139 aa4.14□□□□□ -1.75
SSR3-208ENST00000496050 CAB39LQ9H9S4 337 aa4.14□□□□□ -1.75
SSR3-208ENST00000496050 SMPD3Q9NY59 655 aaPredicted RBP4.14□□□□□ -1.75
SSR3-208ENST00000496050 COX16Q9P0S2 106 aa4.14□□□□□ -1.75
SSR3-208ENST00000496050 PPIAL4AQ9Y536 164 aa4.14□□□□□ -1.75
SSR3-208ENST00000496050 IGKV3D-20A0A0C4DH25 116 aa4.13□□□□□ -1.75
SSR3-208ENST00000496050 IGHV3-35A0A0C4DH35 117 aa4.13□□□□□ -1.75
SSR3-208ENST00000496050 IGHV2-70DA0A0C4DH43 119 aa4.13□□□□□ -1.75
SSR3-208ENST00000496050 PCP4L1A6NKN8 68 aa4.13□□□□□ -1.75
SSR3-208ENST00000496050 ARPC3O15145 178 aa4.13□□□□□ -1.75
SSR3-208ENST00000496050 SCGNO76038 276 aa4.13□□□□□ -1.75
SSR3-208ENST00000496050 GDF1P27539 372 aa4.13□□□□□ -1.75
SSR3-208ENST00000496050 RPL29P47914 159 aaKnown RBP4.13□□□□□ -1.75
SSR3-208ENST00000496050 GANABQ14697 944 aaKnown RBP4.13□□□□□ -1.75
SSR3-208ENST00000496050 PDK3Q15120 406 aa4.13□□□□□ -1.75
SSR3-208ENST00000496050 C10orf120Q5SQS8 335 aa4.13□□□□□ -1.75
SSR3-208ENST00000496050 ZNF658Q5TYW1 1059 aaPredicted RBP4.13□□□□□ -1.75
SSR3-208ENST00000496050 CENPPQ6IPU0 288 aa4.13□□□□□ -1.75
SSR3-208ENST00000496050 UFSP1Q6NVU6 142 aa4.13□□□□□ -1.75
SSR3-208ENST00000496050 CCDC50Q8IVM0 306 aa4.13□□□□□ -1.75
SSR3-208ENST00000496050 LYG1Q8N1E2 194 aa4.13□□□□□ -1.75
SSR3-208ENST00000496050 SIGLEC12Q96PQ1 595 aa4.13□□□□□ -1.75
SSR3-208ENST00000496050 EDEM2Q9BV94 578 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms