RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	EIF1	P41567	113 aa	Known RBP	11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	STAR	P49675	285 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	CASP9	P55211	416 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	CLDN18	P56856	261 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	GPR68	Q15743	365 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	CD226	Q15762	336 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	TIGD2	Q4W5G0	525 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	ARSK	Q6UWY0	536 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	SEM1	Q6ZVN7	128 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	ADGRE4P	Q86SQ3	457 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	RNF130	Q86XS8	419 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	CCDC71	Q8IV32	467 aa	Predicted RBP	11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	GATS	Q8NAP1	163 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	PHOSPHO1	Q8TCT1	267 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	ZFP90	Q8TF47	636 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	GTF2H4	Q92759	462 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	RAB8B	Q92930	207 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	VPS33A	Q96AX1	596 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	TRNT1	Q96Q11	434 aa	Known RBP	11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	TRIB1	Q96RU8	372 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	RUBCNL	Q9H714	662 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	KCNJ16	Q9NPI9	418 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	THUMPD1	Q9NXG2	353 aa	Known RBP	11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	ZNF629	Q9UEG4	869 aa	Predicted RBP	11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899		Q9UFV3	132 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	ICAM5	Q9UMF0	924 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	ZNF337	Q9Y3M9	751 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	WDR45	Q9Y484	360 aa		11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	SPTBN1	Q01082	2364 aa	Known RBP	11.18	□□□□□ -0.62
MRPL55-233	ENST00000495899	ZNF407	Q9C0G0	2248 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	GTF3C1	Q12789	2109 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	MYO7B	Q6PIF6	2116 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	SERINC4	A6NH21	518 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	ZNF264	O43296	627 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	KIAA0513	O60268	411 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	UGT2B17	O75795	530 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	TOX	O94900	526 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	POU3F2	P20265	443 aa	Predicted RBP	11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	ADH6	P28332	368 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	P2RX1	P51575	399 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	EEF1A1	P68104	462 aa	Known RBP	11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	HPCA	P84074	193 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	ZNF117	Q03924	483 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	SRY	Q05066	204 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	SQLE	Q14534	574 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	PLPPR5	Q32ZL2	321 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	SLC25A35	Q3KQZ1	300 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	C6orf10	Q5SRN2	563 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	EEF1A1P5	Q5VTE0	462 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	TYW3	Q6IPR3	259 aa	Known RBP	11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	EIF3M	Q7L2H7	374 aa	Known RBP	11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	CHMP1B	Q7LBR1	199 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	FUNDC1	Q8IVP5	155 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	TOR1AIP2	Q8NFQ8	470 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	TNIP2	Q8NFZ5	429 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	SH3YL1	Q96HL8	342 aa	Predicted RBP	11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	ZFP3	Q96NJ6	502 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	TM9SF2	Q99805	663 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	TUBA1C	Q9BQE3	449 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	CCDC134	Q9H6E4	229 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	MTHFD2L	Q9H903	347 aa	Predicted RBP	11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	TPT1P8	Q9HAU6	139 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	NPHS2	Q9NP85	383 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	SLC52A3	Q9NQ40	469 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	MRGBP	Q9NV56	204 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	MED17	Q9NVC6	651 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	CCDC167	Q9P0B6	97 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	KCNE5	Q9UJ90	142 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	MKLN1	Q9UL63	735 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	CARD8	Q9Y2G2	431 aa		11.17	□□□□□ -0.62
MRPL55-233	ENST00000495899	DIDO1	Q9BTC0	2240 aa	Known RBP	11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	NPIPA5	A0A0B4J1W7	369 aa		11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	CLCA1	A8K7I4	914 aa		11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	TMEM229A	B2RXF0	380 aa		11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	NPIPA7	E9PJI5	369 aa		11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	DVL2	O14641	736 aa		11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	HNRNPR	O43390	633 aa	Known RBP	11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	GMFG	O60234	142 aa		11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	DNAJA2	O60884	412 aa		11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	TNFRSF21	O75509	655 aa		11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	RCBTB2	O95199	551 aa		11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	LINGO3	P0C6S8	592 aa		11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	NPIPA8	P0DM63	369 aa		11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	TROVE2	P10155	538 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	UBL4A	P11441	157 aa		11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	NCF2	P19878	526 aa	Predicted RBP	11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	TCEA1	P23193	301 aa	Known RBP	11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	PSMA4	P25789	261 aa	Known RBP	11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	GRN	P28799	593 aa	Known RBP	11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	MVD	P53602	400 aa		11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	RAC1	P63000	192 aa		11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	RELB	Q01201	579 aa		11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	GNA13	Q14344	377 aa		11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	GPAT3	Q53EU6	434 aa		11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	PDZK1	Q5T2W1	519 aa		11.16	□□□□□ -0.62
MRPL55-233	ENST00000495899	HIST2H2BC	Q6DN03	193 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms