RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 DUS3LQ96G46 650 aaKnown RBP11.97□□□□□ -0.49
ERCC3-209ENST00000494464 SLC39A3Q9BRY0 314 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 EQTNQ9NQ60 294 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 SDHAF3Q9NRP4 125 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 SIRT3Q9NTG7 399 aaPredicted RBP11.97□□□□□ -0.49
ERCC3-209ENST00000494464 ATAD3AQ9NVI7 634 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 CMTM6Q9NX76 183 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 TAS2R10Q9NYW0 307 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 PPP4R1LQ9P1A2 415 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 DKKL1Q9UK85 242 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 PACSIN3Q9UKS6 424 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 LRBAP50851 2863 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 KIAA1549Q9HCM3 1950 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 EMC8O43402 210 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 SCO2O43819 266 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 STAMBPO95630 424 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 PGRP06401 933 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 PRPS1L1P21108 318 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 CHMP24386 653 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 GABRA3P34903 492 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 DSCR4P56555 118 aaPredicted RBP11.96□□□□□ -0.49
ERCC3-209ENST00000494464 FXNQ16595 210 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 MFSD12Q6NUT3 480 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 SLC2A7Q6PXP3 512 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 DLEU7Q6UYE1 221 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 SZRD1Q7Z422 152 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 CAMKMTQ7Z624 323 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 LIX1LQ8IVB5 337 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 RIMKLAQ8IXN7 391 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 DMRTC2Q8IXT2 367 aaPredicted RBP11.96□□□□□ -0.49
ERCC3-209ENST00000494464 RNF148Q8N7C7 305 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 NAXEQ8NCW5 288 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 OR2M3Q8NG83 312 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 OR7A2PQ8NGA2 310 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 OR4K17Q8NGC6 315 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 OR8J3Q8NGG0 315 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 GPR151Q8TDV0 419 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 PYDC1Q8WXC3 89 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 FAM120BQ96EK7 910 aaKnown RBP11.96□□□□□ -0.49
ERCC3-209ENST00000494464 RMND5BQ96G75 393 aaPredicted RBP11.96□□□□□ -0.49
ERCC3-209ENST00000494464 TRIM15Q9C019 465 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 CALHM2Q9HA72 323 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 NEUROD4Q9HD90 331 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 FLRT3Q9NZU0 649 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 AP3M1Q9Y2T2 418 aa11.96□□□□□ -0.49
ERCC3-209ENST00000494464 ABCA12Q86UK0 2595 aa11.96□□□□□ -0.5
ERCC3-209ENST00000494464 IGLV3-32A0A0A0MS00 114 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 GXYLT2A0PJZ3 443 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 KDM4EB2RXH2 506 aaPredicted RBP11.95□□□□□ -0.5
ERCC3-209ENST00000494464 DVL2O14641 736 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 CASQ2O14958 399 aaPredicted RBP11.95□□□□□ -0.5
ERCC3-209ENST00000494464 IL2RAP01589 272 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 IGKV1D-16P01601 117 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 NGFRP08138 427 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 ACP2P11117 423 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 LAMP1P11279 417 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 DPP4P27487 766 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 LCN1P31025 176 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 PRIM2P49643 509 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 CLK3P49761 638 aaKnown RBP11.95□□□□□ -0.5
ERCC3-209ENST00000494464 LHX2P50458 406 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 CAPRIN1Q14444 709 aaKnown RBP11.95□□□□□ -0.5
ERCC3-209ENST00000494464 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.95□□□□□ -0.5
ERCC3-209ENST00000494464 FAM174BQ3ZCQ3 159 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 SPANXN4Q5MJ08 99 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 CPTPQ5TA50 214 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 OR5M10Q6IEU7 315 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 LCN8Q6JVE9 175 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 ADGRE4PQ86SQ3 457 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 RELL2Q8NC24 303 aaPredicted RBP11.95□□□□□ -0.5
ERCC3-209ENST00000494464 SLC16A11Q8NCK7 471 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 TNIP2Q8NFZ5 429 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 NRG4Q8WWG1 115 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 OR5P2Q8WZ92 322 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 PIK3R3Q92569 461 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 SLC9A6Q92581 669 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 COQ8BQ96D53 544 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 SFXN2Q96NB2 322 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 UCN2Q96RP3 112 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 PRPF18Q99633 342 aaKnown RBP11.95□□□□□ -0.5
ERCC3-209ENST00000494464 CGREF1Q99674 301 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 BHLHE41Q9C0J9 482 aaPredicted RBP11.95□□□□□ -0.5
ERCC3-209ENST00000494464 SLC24A3Q9HC58 644 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 HHATLQ9HCP6 504 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 ZCCHC3Q9NUD5 404 aaKnown RBP11.95□□□□□ -0.5
ERCC3-209ENST00000494464 C6orf203Q9P0P8 240 aaPredicted RBP11.95□□□□□ -0.5
ERCC3-209ENST00000494464 ZNF629Q9UEG4 869 aaPredicted RBP11.95□□□□□ -0.5
ERCC3-209ENST00000494464 CSMD2Q7Z408 3487 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 DOCK7Q96N67 2140 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 CSMD1Q96PZ7 3565 aa11.95□□□□□ -0.5
ERCC3-209ENST00000494464 INTS1Q8N201 2190 aaKnown RBP11.95□□□□□ -0.5
ERCC3-209ENST00000494464 PRSS51A0A1B0GVH4 220 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 A0A1W2PRB8 838 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 TCRBV3S1A0A5B6 114 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 AQP12BA6NM10 295 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 C17orf51A8MQB3 221 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 ZIC3O60481 467 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 UTS2O95399 124 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 ZNF708P17019 499 aa11.94□□□□□ -0.5
ERCC3-209ENST00000494464 EFNA1P20827 205 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms