RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 PHOSPHO1Q8TCT1 267 aa12.02□□□□□ -0.49
CTDSP1-212ENST00000494067 OR5P2Q8WZ92 322 aa12.02□□□□□ -0.49
CTDSP1-212ENST00000494067 CDS1Q92903 461 aa12.02□□□□□ -0.49
CTDSP1-212ENST00000494067 CAVIN3Q969G5 261 aa12.02□□□□□ -0.49
CTDSP1-212ENST00000494067 PIK3IP1Q96FE7 263 aa12.02□□□□□ -0.49
CTDSP1-212ENST00000494067 SH3YL1Q96HL8 342 aaPredicted RBP12.02□□□□□ -0.49
CTDSP1-212ENST00000494067 GMPPAQ96IJ6 420 aaPredicted RBP12.02□□□□□ -0.49
CTDSP1-212ENST00000494067 ADGRG7Q96K78 797 aa12.02□□□□□ -0.49
CTDSP1-212ENST00000494067 ACTRT3Q9BYD9 372 aa12.02□□□□□ -0.49
CTDSP1-212ENST00000494067 KLHL4Q9C0H6 718 aa12.02□□□□□ -0.49
CTDSP1-212ENST00000494067 PIGUQ9H490 435 aa12.02□□□□□ -0.49
CTDSP1-212ENST00000494067 DUSP22Q9NRW4 184 aa12.02□□□□□ -0.49
CTDSP1-212ENST00000494067 GIN1Q9NXP7 522 aa12.02□□□□□ -0.49
CTDSP1-212ENST00000494067 C6orf203Q9P0P8 240 aaPredicted RBP12.02□□□□□ -0.49
CTDSP1-212ENST00000494067 ITPR3Q14573 2671 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 C7orf72A4D263 438 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 GTPBP1O00178 669 aaKnown RBP12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 SMPD2O60906 423 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 C1QCP02747 245 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 HMGN2P05204 90 aaKnown RBP12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 PRPS1L1P21108 318 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 CRYGSP22914 178 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 SHC1P29353 583 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 NKX6-1P78426 367 aaPredicted RBP12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 ZNF844Q08AG5 666 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 MPP2Q14168 576 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 LASP1Q14847 261 aaKnown RBP12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 IL23RQ5VWK5 629 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 HBMQ6B0K9 141 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 CDC73Q6P1J9 531 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 WDR93Q6P2C0 686 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 BEND4Q6ZU67 534 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 OLIG3Q7RTU3 272 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 CLEC4FQ8N1N0 589 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 PSMA8Q8TAA3 256 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 ARL8AQ96BM9 186 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 TUBGCP3Q96CW5 907 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 ZC3HAV1LQ96H79 300 aaKnown RBP12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 RNF145Q96MT1 663 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 TMEM109Q9BVC6 243 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 SERHL2Q9H4I8 314 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 PLSCR4Q9NRQ2 329 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 MED17Q9NVC6 651 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 GPATCH2Q9NW75 528 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 NF1P21359 2839 aa12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 RAI1Q7Z5J4 1906 aaPredicted RBP12.01□□□□□ -0.49
CTDSP1-212ENST00000494067 ZFHX3Q15911 3703 aa12□□□□□ -0.49
CTDSP1-212ENST00000494067 TNFSF11O14788 317 aa12□□□□□ -0.49
CTDSP1-212ENST00000494067 EFNA2O43921 213 aa12□□□□□ -0.49
CTDSP1-212ENST00000494067 CXCL13O43927 109 aa12□□□□□ -0.49
CTDSP1-212ENST00000494067 C6orf47O95873 294 aa12□□□□□ -0.49
CTDSP1-212ENST00000494067 CD53P19397 219 aa12□□□□□ -0.49
CTDSP1-212ENST00000494067 SUMO3P55854 103 aaPredicted RBP12□□□□□ -0.49
CTDSP1-212ENST00000494067 CARD18P57730 90 aa12□□□□□ -0.49
CTDSP1-212ENST00000494067 PLPPR5Q32ZL2 321 aa12□□□□□ -0.49
CTDSP1-212ENST00000494067 NDUFAF6Q330K2 333 aa12□□□□□ -0.49
CTDSP1-212ENST00000494067 CBLN3Q6UW01 205 aa12□□□□□ -0.49
CTDSP1-212ENST00000494067 KRTAP1-3Q8IUG1 177 aa12□□□□□ -0.49
CTDSP1-212ENST00000494067 LILRA2Q8N149 483 aa12□□□□□ -0.49
CTDSP1-212ENST00000494067 ZNF781Q8N8C0 355 aa12□□□□□ -0.49
CTDSP1-212ENST00000494067 OR5AK3PQ8NH89 298 aa12□□□□□ -0.49
CTDSP1-212ENST00000494067 OR2V1Q8NHB1 315 aa12□□□□□ -0.49
CTDSP1-212ENST00000494067 COQ8BQ96D53 544 aa12□□□□□ -0.49
CTDSP1-212ENST00000494067 ARSGQ96EG1 525 aa12□□□□□ -0.49
CTDSP1-212ENST00000494067 PPP1R36Q96LQ0 422 aa12□□□□□ -0.49
CTDSP1-212ENST00000494067 PIP5K1AQ99755 562 aa12□□□□□ -0.49
CTDSP1-212ENST00000494067 PCDHGB4Q9UN71 923 aa12□□□□□ -0.49
CTDSP1-212ENST00000494067 CENPVL1A0A0U1RR11 272 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 WDR91A4D1P6 747 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 DUXAA6NLW8 204 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 FAM171A2A8MVW0 826 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 DEFB108AA8MXU0 73 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 ADAMDEC1O15204 470 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 SS18L1O75177 396 aaPredicted RBP11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 TUBBP07437 444 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 G6PDP11413 515 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 NID1P14543 1247 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 ELK4P28324 431 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 ADH6P28332 368 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 ADSLP30566 484 aaPredicted RBP11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 SOAT1P35610 550 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 P2RX1P51575 399 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 RPS26P62854 115 aaKnown RBP11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 ZNF117Q03924 483 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 ACKR1Q16570 336 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 TMEM201Q5SNT2 666 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 DCST2Q5T1A1 773 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 EMBQ6PCB8 327 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 ZNF550Q7Z398 422 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 BIVMQ86UB2 503 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 NUDCD3Q8IVD9 361 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 CLECL1Q8IZS7 167 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 KIRREL3Q8IZU9 778 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 MREGQ8N565 214 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 ZNF614Q8N883 585 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 OR5D16Q8NGK9 328 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 SFXN5Q8TD22 340 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 OSTF1Q92882 214 aa11.99□□□□□ -0.49
CTDSP1-212ENST00000494067 CPNE4Q96A23 557 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms