RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	SLC23A2	Q9UGH3	650 aa		10.83	□□□□□ -0.68
BRCA1-222	ENST00000493919	ASPM	Q8IZT6	3477 aa		10.83	□□□□□ -0.68
BRCA1-222	ENST00000493919	UBA6	A0AVT1	1052 aa	Predicted RBP	10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	CPED1	A4D0V7	1026 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	LRRTM2	O43300	516 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	TNFSF14	O43557	240 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	OR1I1	O60431	355 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	AHSG	P02765	367 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	F7	P08709	466 aa	Predicted RBP	10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	ITGAM	P11215	1152 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	ATP1B2	P14415	290 aa	Predicted RBP	10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	ZNF26	P17031	533 aa	Predicted RBP	10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	EEF1B2	P24534	225 aa	Known RBP	10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	ELK3	P41970	407 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	NSG1	P42857	185 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	ETV4	P43268	484 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	PRLHR	P49683	370 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	MRPL49	Q13405	166 aa	Known RBP	10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	GPR176	Q14439	515 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	NR0B2	Q15466	257 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	ZNF470	Q6ECI4	717 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	MRNIP	Q6NTE8	343 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	GUSBP11	Q6P575	273 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	SLC16A14	Q7RTX9	510 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	AMZ2	Q86W34	360 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	DNAJC22	Q8N4W6	341 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	C17orf47	Q8NEP4	570 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	OR2D3	Q8NGH3	330 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	FBXO25	Q8TCJ0	367 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	PHOSPHO1	Q8TCT1	267 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	OIT3	Q8WWZ8	545 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	ZNF48	Q96MX3	618 aa	Predicted RBP	10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	EBNA1BP2	Q99848	306 aa	Known RBP	10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	TMPRSS5	Q9H3S3	457 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	DSN1	Q9H410	356 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	TOR3A	Q9H497	397 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	EXO5	Q9H790	373 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	ZMAT3	Q9HA38	289 aa	Known RBP	10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	SLC22A11	Q9NSA0	550 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	POMP	Q9Y244	141 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	MRPS18C	Q9Y3D5	142 aa	Known RBP	10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	HSPB11	Q9Y547	144 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	IGLV3-16	A0A075B6K0	115 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	ZCWPW2	A0A1B0GU75	182 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	LRRN3	E7EW58	273 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	ARPC5	O15511	151 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	GADD45G	O95257	159 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	RAF1	P04049	648 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	LIPF	P07098	398 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	FTH1P19	P0C7X4	201 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	RAB3B	P20337	219 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	RPL10	P27635	214 aa	Known RBP	10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	CD1B	P29016	333 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	LCN1	P31025	176 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	CPOX	P36551	454 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	CAPZB	P47756	277 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	TTPA	P49638	278 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	CLDN8	P56748	225 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	RAB2A	P61019	212 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	MERTK	Q12866	999 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	MPPED2	Q15777	294 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	YOD1	Q5VVQ6	348 aa	Predicted RBP	10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	LYPLAL1	Q5VWZ2	237 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	LAMTOR1	Q6IAA8	161 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	C16orf89	Q6UX73	402 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	TMEM135	Q86UB9	458 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	KLB	Q86Z14	1044 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	SNX29P2	Q8IUI4	249 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	IGDCC3	Q8IVU1	814 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	FBXO36	Q8NEA4	188 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	TRMT10A	Q8TBZ6	339 aa	Known RBP	10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	TCTEX1D2	Q8WW35	142 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	NXNL1	Q96CM4	212 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	RRNAD1	Q96FB5	475 aa	Known RBP	10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	MISP3	Q96FF7	219 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	COL21A1	Q96P44	957 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	WDR83	Q9BRX9	315 aa	Known RBP	10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	SEMA4C	Q9C0C4	833 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	MFF	Q9GZY8	342 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	LRRN3	Q9H3W5	708 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	SSU72	Q9NP77	194 aa	Known RBP	10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	SAYSD1	Q9NPB0	183 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	FAM212B	Q9NTI7	297 aa	Predicted RBP	10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	SOHLH2	Q9NX45	425 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	METTL1	Q9UBP6	276 aa	Known RBP	10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	GHRL	Q9UBU3	117 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	PRSS21	Q9Y6M0	314 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	SPACA6	W5XKT8	324 aa		10.82	□□□□□ -0.68
BRCA1-222	ENST00000493919	LY6G6E	A0A0G2JKS1	128 aa		10.81	□□□□□ -0.68
BRCA1-222	ENST00000493919		H0YAE9	185 aa		10.81	□□□□□ -0.68
BRCA1-222	ENST00000493919	PPP6C	O00743	305 aa		10.81	□□□□□ -0.68
BRCA1-222	ENST00000493919	NDUFS3	O75489	264 aa		10.81	□□□□□ -0.68
BRCA1-222	ENST00000493919	TTC4	O95801	387 aa		10.81	□□□□□ -0.68
BRCA1-222	ENST00000493919	EML2	O95834	649 aa		10.81	□□□□□ -0.68
BRCA1-222	ENST00000493919	PPBP	P02775	128 aa		10.81	□□□□□ -0.68
BRCA1-222	ENST00000493919	ATP6V1B2	P21281	511 aa		10.81	□□□□□ -0.68
BRCA1-222	ENST00000493919	ITGA3	P26006	1051 aa		10.81	□□□□□ -0.68
BRCA1-222	ENST00000493919	DUSP3	P51452	185 aa	Predicted RBP	10.81	□□□□□ -0.68
BRCA1-222	ENST00000493919	AP3S2	P59780	193 aa		10.81	□□□□□ -0.68

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