RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 DCST2Q5T1A1 773 aa21.22■□□□□ 0.99
RHBDD3-206ENST00000493894 HBMQ6B0K9 141 aa21.22■□□□□ 0.99
RHBDD3-206ENST00000493894 ZNF550Q7Z398 422 aa21.22■□□□□ 0.99
RHBDD3-206ENST00000493894 KRTCAP2Q8N6L1 136 aa21.22■□□□□ 0.99
RHBDD3-206ENST00000493894 PHOSPHO1Q8TCT1 267 aa21.22■□□□□ 0.99
RHBDD3-206ENST00000493894 COQ8BQ96D53 544 aa21.22■□□□□ 0.99
RHBDD3-206ENST00000493894 BHLHE41Q9C0J9 482 aaPredicted RBP21.22■□□□□ 0.99
RHBDD3-206ENST00000493894 HOXD1Q9GZZ0 328 aa21.22■□□□□ 0.99
RHBDD3-206ENST00000493894 DLL4Q9NR61 685 aa21.22■□□□□ 0.99
RHBDD3-206ENST00000493894 GLRX2Q9NS18 164 aa21.22■□□□□ 0.99
RHBDD3-206ENST00000493894 CFLARO15519 480 aa21.21■□□□□ 0.99
RHBDD3-206ENST00000493894 NUDT14O95848 222 aa21.21■□□□□ 0.99
RHBDD3-206ENST00000493894 OPN1LWP04000 364 aa21.21■□□□□ 0.99
RHBDD3-206ENST00000493894 LINGO3P0C6S8 592 aa21.21■□□□□ 0.99
RHBDD3-206ENST00000493894 FOSL1P15407 271 aa21.21■□□□□ 0.99
RHBDD3-206ENST00000493894 ELK4P28324 431 aa21.21■□□□□ 0.99
RHBDD3-206ENST00000493894 SOAT1P35610 550 aa21.21■□□□□ 0.99
RHBDD3-206ENST00000493894 ETV4P43268 484 aa21.21■□□□□ 0.99
RHBDD3-206ENST00000493894 FOXF1Q12946 379 aa21.21■□□□□ 0.99
RHBDD3-206ENST00000493894 WFDC11Q8NEX6 87 aa21.21■□□□□ 0.99
RHBDD3-206ENST00000493894 POC1BQ8TC44 478 aa21.21■□□□□ 0.99
RHBDD3-206ENST00000493894 ZC3HAV1LQ96H79 300 aaKnown RBP21.21■□□□□ 0.99
RHBDD3-206ENST00000493894 KLHL15Q96M94 604 aa21.21■□□□□ 0.99
RHBDD3-206ENST00000493894 KLHDC3Q9BQ90 382 aa21.21■□□□□ 0.99
RHBDD3-206ENST00000493894 DUSP26Q9BV47 211 aa21.21■□□□□ 0.99
RHBDD3-206ENST00000493894 KLHL4Q9C0H6 718 aa21.21■□□□□ 0.99
RHBDD3-206ENST00000493894 FANCFQ9NPI8 374 aa21.21■□□□□ 0.99
RHBDD3-206ENST00000493894 GPATCH2Q9NW75 528 aa21.21■□□□□ 0.99
RHBDD3-206ENST00000493894 NPIPA5A0A0B4J1W7 369 aa21.2■□□□□ 0.98
RHBDD3-206ENST00000493894 NPIPA7E9PJI5 369 aa21.2■□□□□ 0.98
RHBDD3-206ENST00000493894 NPIPA8P0DM63 369 aa21.2■□□□□ 0.98
RHBDD3-206ENST00000493894 G6PDP11413 515 aa21.2■□□□□ 0.98
RHBDD3-206ENST00000493894 SUMO3P55854 103 aaPredicted RBP21.2■□□□□ 0.98
RHBDD3-206ENST00000493894 WDR93Q6P2C0 686 aa21.2■□□□□ 0.98
RHBDD3-206ENST00000493894 BHLHB9Q6PI77 547 aa21.2■□□□□ 0.98
RHBDD3-206ENST00000493894 NUDCD3Q8IVD9 361 aa21.2■□□□□ 0.98
RHBDD3-206ENST00000493894 RIMKLAQ8IXN7 391 aa21.2■□□□□ 0.98
RHBDD3-206ENST00000493894 LILRA2Q8N149 483 aa21.2■□□□□ 0.98
RHBDD3-206ENST00000493894 OR5AK3PQ8NH89 298 aa21.2■□□□□ 0.98
RHBDD3-206ENST00000493894 NUDT8Q8WV74 236 aa21.2■□□□□ 0.98
RHBDD3-206ENST00000493894 PLSCR4Q9NRQ2 329 aa21.2■□□□□ 0.98
RHBDD3-206ENST00000493894 NOP53Q9NZM5 478 aaKnown RBP21.2■□□□□ 0.98
RHBDD3-206ENST00000493894 A0A0J9YW62 118 aa21.19■□□□□ 0.98
RHBDD3-206ENST00000493894 HOXC12P31275 282 aa21.19■□□□□ 0.98
RHBDD3-206ENST00000493894 P2RX1P51575 399 aa21.19■□□□□ 0.98
RHBDD3-206ENST00000493894 C21orf58P58505 322 aa21.19■□□□□ 0.98
RHBDD3-206ENST00000493894 KRT71Q3SY84 523 aa21.19■□□□□ 0.98
RHBDD3-206ENST00000493894 KLHL26Q53HC5 615 aa21.19■□□□□ 0.98
RHBDD3-206ENST00000493894 ZNF614Q8N883 585 aa21.19■□□□□ 0.98
RHBDD3-206ENST00000493894 PKNOX2Q96KN3 472 aa21.19■□□□□ 0.98
RHBDD3-206ENST00000493894 ZIM3Q96PE6 472 aa21.19■□□□□ 0.98
RHBDD3-206ENST00000493894 TMEM109Q9BVC6 243 aa21.19■□□□□ 0.98
RHBDD3-206ENST00000493894 ASIC5Q9NY37 505 aa21.19■□□□□ 0.98
RHBDD3-206ENST00000493894 TUBBP07437 444 aa21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 PPP3CBP16298 524 aa21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 IL11P20809 199 aa21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 SFTPDP35247 375 aa21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 RNF144AP50876 292 aaPredicted RBP21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 ATP12AP54707 1039 aa21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 HBA1P69905 142 aa21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 NKX6-1P78426 367 aaPredicted RBP21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 EMX2Q04743 252 aa21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 PDCD2Q16342 344 aaPredicted RBP21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 ANKRD34AQ69YU3 496 aa21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 GTF2IRD2BQ6EKJ0 949 aa21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 CBLN3Q6UW01 205 aa21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 GTF2IRD2Q86UP8 949 aa21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 STK32CQ86UX6 486 aa21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 CXorf67Q86X51 503 aaPredicted RBP21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 PIGTQ969N2 578 aa21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 REXO5Q96IC2 774 aaKnown RBP21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 OR7D2Q96RA2 312 aa21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 UBTD1Q9HAC8 227 aa21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 ICAM5Q9UMF0 924 aa21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 CARD8Q9Y2G2 431 aa21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 ACTL7BQ9Y614 415 aa21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 GPC6Q9Y625 555 aaPredicted RBP21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 KCNE3Q9Y6H6 103 aa21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 FLNAP21333 2647 aaKnown RBP21.18■□□□□ 0.98
RHBDD3-206ENST00000493894 GJE1A6NN92 205 aa21.17■□□□□ 0.98
RHBDD3-206ENST00000493894 GTPBP1O00178 669 aaKnown RBP21.17■□□□□ 0.98
RHBDD3-206ENST00000493894 OIP5O43482 229 aa21.17■□□□□ 0.98
RHBDD3-206ENST00000493894 SERPINE1P05121 402 aa21.17■□□□□ 0.98
RHBDD3-206ENST00000493894 PABPC4LP0CB38 370 aaKnown RBP21.17■□□□□ 0.98
RHBDD3-206ENST00000493894 FPR1P21462 350 aa21.17■□□□□ 0.98
RHBDD3-206ENST00000493894 ADH6P28332 368 aa21.17■□□□□ 0.98
RHBDD3-206ENST00000493894 CLDN8P56748 225 aa21.17■□□□□ 0.98
RHBDD3-206ENST00000493894 CARD18P57730 90 aa21.17■□□□□ 0.98
RHBDD3-206ENST00000493894 ZNF239Q16600 458 aaKnown RBP21.17■□□□□ 0.98
RHBDD3-206ENST00000493894 SMU1Q2TAY7 513 aa21.17■□□□□ 0.98
RHBDD3-206ENST00000493894 PGS1Q32NB8 556 aa21.17■□□□□ 0.98
RHBDD3-206ENST00000493894 SHEQ5VZ18 495 aa21.17■□□□□ 0.98
RHBDD3-206ENST00000493894 BEND4Q6ZU67 534 aa21.17■□□□□ 0.98
RHBDD3-206ENST00000493894 MREGQ8N565 214 aa21.17■□□□□ 0.98
RHBDD3-206ENST00000493894 OR5D16Q8NGK9 328 aa21.17■□□□□ 0.98
RHBDD3-206ENST00000493894 RNF128Q8TEB7 428 aa21.17■□□□□ 0.98
RHBDD3-206ENST00000493894 OSTF1Q92882 214 aa21.17■□□□□ 0.98
RHBDD3-206ENST00000493894 CPNE4Q96A23 557 aaPredicted RBP21.17■□□□□ 0.98
RHBDD3-206ENST00000493894 MARK4Q96L34 752 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms