RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 A0A1W2PQD3 144 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 TLDC2A0PJX2 215 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 TMEM233B4DJY2 109 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 INAFM1C9JVW0 142 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 HS3ST1O14792 307 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 LSM1O15116 133 aaKnown RBP9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 TRIM13O60858 407 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 HSPA4LO95757 839 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 NUDT14O95848 222 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 CHRNGP07510 517 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 LINGO3P0C6S8 592 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 PABPC4LP0CB38 370 aaKnown RBP9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 BCKDHAP12694 445 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 PAX1P15863 534 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 PSMB1P20618 241 aaKnown RBP9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 EIF1P41567 113 aaKnown RBP9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 ASMTP46597 345 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 PRIM2P49643 509 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 CARD18P57730 90 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 POU6F2P78424 691 aaPredicted RBP9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 ZNF117Q03924 483 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 PCLAFQ15004 111 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 CD226Q15762 336 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 ZNF239Q16600 458 aaKnown RBP9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 ALKBH2Q6NS38 261 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 ZCCHC12Q6PEW1 402 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 RNF165Q6ZSG1 346 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 TRABD2AQ86V40 505 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 POC1BQ8TC44 478 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 AGR3Q8TD06 166 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 RNF128Q8TEB7 428 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 TWIST2Q8WVJ9 160 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 ROBO4Q8WZ75 1007 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 OSTF1Q92882 214 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 CDS1Q92903 461 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 MTERF3Q96E29 417 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 FAM120BQ96EK7 910 aaKnown RBP9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 KLHL15Q96M94 604 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 KLHDC3Q9BQ90 382 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 TACO1Q9BSH4 297 aaKnown RBP9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 TMEM204Q9BSN7 226 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 TRMOQ9BU70 441 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 BTBD2Q9BX70 525 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 OR10A4Q9H209 315 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 PPCSQ9HAB8 311 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 TIGARQ9NQ88 270 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 ZCCHC3Q9NUD5 404 aaKnown RBP9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 ZNF701Q9NV72 531 aaPredicted RBP9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 MID2Q9UJV3 735 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 TMED5Q9Y3A6 229 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 TRAF6Q9Y4K3 522 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 SNX8Q9Y5X2 465 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 DNHD1Q96M86 4753 aa9.16□□□□□ -0.94
NUDCD3-210ENST00000493613 USF3Q68DE3 2245 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 KIAA1324LA8MWY0 1029 aaPredicted RBP9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 TMEM114B3SHH9 223 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 PIP5K1BO14986 540 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 TMCC2O75069 709 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 HMGN2P05204 90 aaKnown RBP9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 FGF4P08620 206 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 DDX5P17844 614 aaKnown RBP9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 ATP6V1C1P21283 382 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 ELK4P28324 431 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 SHC1P29353 583 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 HPCAL1P37235 193 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 RNF144AP50876 292 aaPredicted RBP9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 ATP5J2P56134 94 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 ZNF844Q08AG5 666 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 FOXF1Q12946 379 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 LASP1Q14847 261 aaKnown RBP9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 MLC1Q15049 377 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 RNPS1Q15287 305 aaKnown RBP9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 ARL13AQ5H913 290 aaPredicted RBP9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 EXOSC6Q5RKV6 272 aaKnown RBP9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 TMEM201Q5SNT2 666 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 LRIG3Q6UXM1 1119 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 R3HCC1LQ7Z5L2 792 aaKnown RBP9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 MTERF4Q7Z6M4 381 aaKnown RBP9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 EIF1ADQ8N9N8 165 aaKnown RBP9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 ZNF527Q8NB42 609 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 STEAP2Q8NFT2 490 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 OR7A2PQ8NGA2 310 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 RAB3IL1Q8TBN0 382 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 PHOSPHO1Q8TCT1 267 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 ABHD3Q8WU67 409 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 AKAP1Q92667 903 aaKnown RBP eCLIP9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 CPNE4Q96A23 557 aaPredicted RBP9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 S100PBPQ96BU1 408 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 STACQ99469 402 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 HDHD5Q9BXW7 423 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 DUSP22Q9NRW4 184 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 SIRT3Q9NTG7 399 aaPredicted RBP9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 GIN1Q9NXP7 522 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 KLHL13Q9P2N7 655 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 GIMAP2Q9UG22 337 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 LAMP3Q9UQV4 416 aa9.15□□□□□ -0.94
NUDCD3-210ENST00000493613 YLPM1P49750 1951 aaKnown RBP9.15□□□□□ -0.95
NUDCD3-210ENST00000493613 GJE1A6NN92 205 aa9.14□□□□□ -0.95
NUDCD3-210ENST00000493613 SCAMP2O15127 329 aaKnown RBP9.14□□□□□ -0.95
NUDCD3-210ENST00000493613 CLOCKO15516 846 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms