RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 FAM173AQ9BQD7 235 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 SDHAF3Q9NRP4 125 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 TUBA8Q9NY65 449 aaPredicted RBP15.7■□□□□ 0.1
LIME1-208ENST00000493265 ANAPC2Q9UJX6 822 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 SLC13A4Q9UKG4 626 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 B3GNT3Q9Y2A9 372 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 CARD8Q9Y2G2 431 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 HRH3Q9Y5N1 445 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 WIF1Q9Y5W5 379 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 V9GYQ6 96 aa15.7■□□□□ 0.1
LIME1-208ENST00000493265 EML6Q6ZMW3 1958 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 A0A1W2PQD3 144 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 ANKRD65E5RJM6 399 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 KLRC4-KLRK1H3BQV0 150 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 HCRTR2O43614 444 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 BCAS1O75363 584 aaPredicted RBP15.69■□□□□ 0.1
LIME1-208ENST00000493265 STAMBPO95630 424 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 IFNA14P01570 189 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 UBTFL6P0CB48 400 aaPredicted RBP15.69■□□□□ 0.1
LIME1-208ENST00000493265 UBL4AP11441 157 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 NID1P14543 1247 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 CCR4P51679 360 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 CRYBA2P53672 197 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 GAS1P54826 345 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 PLGLB1Q02325 96 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 SNTA1Q13424 505 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 TRIM25Q14258 630 aaKnown RBP15.69■□□□□ 0.1
LIME1-208ENST00000493265 FGFBP1Q14512 234 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 PLEKHN1Q494U1 663 aaPredicted RBP15.69■□□□□ 0.1
LIME1-208ENST00000493265 TBCELQ5QJ74 424 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 SLC6A19Q695T7 634 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 PGM2L1Q6PCE3 622 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 Q6ZS92 163 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 DHFR2Q86XF0 187 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 CLIP4Q8N3C7 705 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 CNOT9Q92600 299 aaKnown RBP15.69■□□□□ 0.1
LIME1-208ENST00000493265 ZNF597Q96LX8 424 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 NSMCE2Q96MF7 247 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 MED11Q9P086 117 aa15.69■□□□□ 0.1
LIME1-208ENST00000493265 ANKRD33BA6NCL7 494 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 FRS3O43559 492 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 SNX4O95219 450 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 THBS1P07996 1170 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 ATP6V1B2P21281 511 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 TCEA1P23193 301 aaKnown RBP15.68■□□□□ 0.1
LIME1-208ENST00000493265 ERFP50548 548 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 EEF1A1P68104 462 aaKnown RBP15.68■□□□□ 0.1
LIME1-208ENST00000493265 ZNF117Q03924 483 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 C17orf67Q0P5P2 114 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 FNDC7Q5VTL7 733 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 AP1ARQ63HQ0 302 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 TMEM81Q6P7N7 255 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 ZNF771Q7L3S4 317 aaPredicted RBP15.68■□□□□ 0.1
LIME1-208ENST00000493265 TEX19Q8NA77 164 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 OR4K17Q8NGC6 315 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 OR1J4Q8NGS1 313 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 RNF138Q8WVD3 245 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 LRGUKQ96M69 825 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 GNRHR2Q96P88 292 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 PINK1Q9BXM7 581 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 RSPO3Q9BXY4 272 aaPredicted RBP15.68■□□□□ 0.1
LIME1-208ENST00000493265 DSN1Q9H410 356 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 ARMC7Q9H6L4 198 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 ADPRHL2Q9NX46 363 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 SLC7A8Q9UHI5 535 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 BOKQ9UMX3 212 aaPredicted RBP15.68■□□□□ 0.1
LIME1-208ENST00000493265 SLC35A3Q9Y2D2 325 aa15.68■□□□□ 0.1
LIME1-208ENST00000493265 FAM166BA8MTA8 275 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 ADAM10O14672 748 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 ZNF264O43296 627 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 CDC40O60508 579 aaKnown RBP eCLIP15.67■□□□□ 0.1
LIME1-208ENST00000493265 TRIM3O75382 744 aaPredicted RBP15.67■□□□□ 0.1
LIME1-208ENST00000493265 CIB2O75838 187 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 NUDT14O95848 222 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 GKN3PP0CG01 181 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 TNFRSF1BP20333 461 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 CD247P20963 164 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 PRKAR1BP31321 381 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 RYKP34925 604 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 FLOT2Q14254 428 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 TOMM20Q15388 145 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 DUSP7Q16829 419 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 EIPR1Q53HC9 387 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 DHRS4L2Q6PKH6 230 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 CBLN3Q6UW01 205 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 COMTD1Q86VU5 262 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 PLCZ1Q86YW0 608 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 WDSUB1Q8N9V3 476 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 FAM98AQ8NCA5 519 aaKnown RBP15.67■□□□□ 0.1
LIME1-208ENST00000493265 GPR32P1Q8NGA4 272 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 B4GALNT2Q8NHY0 566 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 VANGL1Q8TAA9 524 aaPredicted RBP15.67■□□□□ 0.1
LIME1-208ENST00000493265 UTP4Q969X6 686 aaKnown RBP15.67■□□□□ 0.1
LIME1-208ENST00000493265 ASB9Q96DX5 294 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 TMEM41AQ96HV5 264 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 MMADHCQ9H3L0 296 aaPredicted RBP15.67■□□□□ 0.1
LIME1-208ENST00000493265 ACTR3BQ9P1U1 418 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 POMPQ9Y244 141 aa15.67■□□□□ 0.1
LIME1-208ENST00000493265 SPENQ96T58 3664 aaKnown RBP15.66■□□□□ 0.1
LIME1-208ENST00000493265 CDHR4A6H8M9 788 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms