RNA–Protein interactions for RNA: ENST00000492980.1

CCDC88B-208, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 5

Gene CCDC88B, Length 2,118 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-208ENST00000492980 PHC2Q8IXK0 858 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 CAMKK1Q8N5S9 505 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 RCBTB1Q8NDN9 531 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 FANK1Q8TC84 345 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 RFKQ969G6 155 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 COX4I2Q96KJ9 171 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 CD180Q99467 661 aa19.51■□□□□ 0.71
CCDC88B-208ENST00000492980 EML5Q05BV3 1969 aa19.5■□□□□ 0.71
CCDC88B-208ENST00000492980 A0A0B4J2E0 115 aa19.5■□□□□ 0.71
CCDC88B-208ENST00000492980 A0A1B0GX12 115 aa19.5■□□□□ 0.71
CCDC88B-208ENST00000492980 TMEM129A0AVI4 362 aa19.5■□□□□ 0.71
CCDC88B-208ENST00000492980 ADAM11O75078 769 aa19.5■□□□□ 0.71
CCDC88B-208ENST00000492980 CD1CP29017 333 aa19.5■□□□□ 0.71
CCDC88B-208ENST00000492980 PGDP52209 483 aa19.5■□□□□ 0.71
CCDC88B-208ENST00000492980 WNT4P56705 351 aa19.5■□□□□ 0.71
CCDC88B-208ENST00000492980 IFITM3Q01628 133 aa19.5■□□□□ 0.71
CCDC88B-208ENST00000492980 FUT7Q11130 342 aa19.5■□□□□ 0.71
CCDC88B-208ENST00000492980 KCNAB1Q14722 419 aa19.5■□□□□ 0.71
CCDC88B-208ENST00000492980 GDPGP1Q6ZNW5 385 aa19.5■□□□□ 0.71
CCDC88B-208ENST00000492980 GRHL3Q8TE85 626 aa19.5■□□□□ 0.71
CCDC88B-208ENST00000492980 HS6ST2Q96MM7 605 aa19.5■□□□□ 0.71
CCDC88B-208ENST00000492980 LRIT1Q9P2V4 623 aa19.5■□□□□ 0.71
CCDC88B-208ENST00000492980 STUB1Q9UNE7 303 aa19.5■□□□□ 0.71
CCDC88B-208ENST00000492980 EXOSC1Q9Y3B2 195 aaKnown RBP19.5■□□□□ 0.71
CCDC88B-208ENST00000492980 NPIPB9F8W1W9 429 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 CT45A8P0DMV1 189 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 CT45A9P0DMV2 189 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 TBXA2RP21731 343 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 PSMA1P25786 263 aaKnown RBP19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 ACAA2P42765 397 aaKnown RBP19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 GRM7Q14831 915 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 ZNF141Q15928 474 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 CT45A2Q5DJT8 189 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 LIPKQ5VXJ0 399 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 TMPRSS11FQ6ZWK6 438 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 SNX29P2Q8IUI4 249 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 BBS1Q8NFJ9 593 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 C16orf52Q8NHV5 167 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 TRMT61AQ96FX7 289 aaKnown RBP19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 ZNF578Q96N58 590 aaPredicted RBP19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 OR10A5Q9H207 317 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 Q9N2J8 555 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 EXOSC4Q9NPD3 245 aaKnown RBP19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 TBCCD1Q9NVR7 557 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 CHCHD3Q9NX63 227 aaKnown RBP19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 CFL2Q9Y281 166 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 TMEM5Q9Y2B1 443 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 MED31Q9Y3C7 131 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 CSNK1G3Q9Y6M4 447 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 A0A1B0GWA3 101 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 CHP2O43745 196 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 HYAL3O43820 417 aaPredicted RBP19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 OR2G6Q5TZ20 316 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 NXNL2Q5VZ03 156 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 OR9Q1Q8NGQ5 310 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 BPIFA2Q96DR5 249 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 PTCHD1Q96NR3 888 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 MEPEQ9NQ76 525 aaPredicted RBP19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 HINT3Q9NQE9 182 aaKnown RBP19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 CBLCQ9ULV8 474 aa19.49■□□□□ 0.71
CCDC88B-208ENST00000492980 H3BMH7 237 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 BHLHE40O14503 412 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 CLPSP04118 112 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 OCM2P0CE71 109 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 OCMP0CE72 109 aaPredicted RBP19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 LIMS3P0CW19 117 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 LIMS4P0CW20 117 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 CPEP16870 476 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 CTBP2P56545 445 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 OR1D5P58170 312 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 FGFBP1Q14512 234 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 NNATQ16517 81 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 ZNF615Q8N8J6 731 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 DNASE2BQ8WZ79 361 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 PHOX2BQ99453 314 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 ENKD1Q9H0I2 346 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 TBC1D17Q9HA65 648 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 MAU2Q9Y6X3 613 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 RFPL3O75679 317 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 IFNA16P05015 189 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 HTR1FP30939 366 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 PPP5CP53041 499 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 OR52L1Q8NGH7 329 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 OR13C2Q8NGS9 318 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 TM9SF4Q92544 642 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 G6PC3Q9BUM1 346 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 ASPNQ9BXN1 380 aa19.48■□□□□ 0.71
CCDC88B-208ENST00000492980 TRIOBPQ9H2D6 2365 aa19.47■□□□□ 0.71
CCDC88B-208ENST00000492980 IGHV1OR21-1A0A087WYE8 117 aa19.47■□□□□ 0.71
CCDC88B-208ENST00000492980 GALNSP34059 522 aa19.47■□□□□ 0.71
CCDC88B-208ENST00000492980 SOX6P35712 828 aa19.47■□□□□ 0.71
CCDC88B-208ENST00000492980 SERTAD2Q14140 314 aa19.47■□□□□ 0.71
CCDC88B-208ENST00000492980 PERM1Q5SV97 790 aa19.47■□□□□ 0.71
CCDC88B-208ENST00000492980 CXXC5Q7LFL8 322 aaKnown RBP19.47■□□□□ 0.71
CCDC88B-208ENST00000492980 CPOQ8IVL8 374 aa19.47■□□□□ 0.71
CCDC88B-208ENST00000492980 CDK20Q8IZL9 346 aa19.47■□□□□ 0.71
CCDC88B-208ENST00000492980 BCORP1Q8N888 145 aa19.47■□□□□ 0.71
CCDC88B-208ENST00000492980 OR4F15Q8NGB8 312 aa19.47■□□□□ 0.71
CCDC88B-208ENST00000492980 CLDN23Q96B33 292 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms