RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 CCNJQ5T5M9 372 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 HBMQ6B0K9 141 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 HDXQ7Z353 690 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 RIMKLAQ8IXN7 391 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 GOLGA6L1Q8N7Z2 621 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 ANKRD42Q8N9B4 389 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 OR4A15Q8NGL6 344 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 FIG4Q92562 907 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 STARD4Q96DR4 205 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 GMPPAQ96IJ6 420 aaPredicted RBP14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 ZBTB18Q99592 522 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 SERINC1Q9NRX5 453 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 MED17Q9NVC6 651 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 GIMAP2Q9UG22 337 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 DTNAQ9Y4J8 743 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 APCP25054 2843 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 RNASET2O00584 256 aaKnown RBP14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 HDAC3O15379 428 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 EIF4E2O60573 245 aaKnown RBP14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 STX11O75558 287 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 TNFSF13O75888 250 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 WDR4P57081 412 aaKnown RBP14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 TESK1Q15569 626 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 APOOLQ6UXV4 268 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 BEND4Q6ZU67 534 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 C6orf120Q7Z4R8 191 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 LILRA2Q8N149 483 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 KRTCAP2Q8N6L1 136 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 TMCO5AQ8N6Q1 288 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 OR8J2Q8NGG1 315 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 OR6K3Q8NGY3 331 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 OR10D3Q8NH80 312 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 OR2V1Q8NHB1 315 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 TESCQ96BS2 214 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 SLC35G5Q96KT7 338 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 PPP1R36Q96LQ0 422 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 RNF145Q96MT1 663 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 ALPK1Q96QP1 1244 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 CXorf36Q9H7Y0 433 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 MANSC1Q9H8J5 431 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 AKTIPQ9H8T0 292 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 SIRT3Q9NTG7 399 aaPredicted RBP14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 ARHGAP21Q5T5U3 1957 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 HCFC1P51610 2035 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 NCKAP5O14513 1909 aa14.9□□□□□ -0.02
PDLIM2-217ENST00000491330 RNF103-CHMP3A0A140T963 221 aa14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 PRSS51A0A1B0GVH4 220 aa14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 CD99P14209 185 aa14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 SLC7A1P30825 629 aa14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 CHI3L1P36222 383 aaPredicted RBP14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 SUCLG1P53597 346 aaKnown RBP14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 CBFBQ13951 182 aa14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 RNPS1Q15287 305 aaKnown RBP14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 PLPPR5Q32ZL2 321 aa14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 TMEM201Q5SNT2 666 aa14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 SPATA19Q7Z5L4 167 aa14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 OR5AK3PQ8NH89 298 aa14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 OIT3Q8WWZ8 545 aa14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 TMEM234Q8WY98 164 aa14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 OSTF1Q92882 214 aa14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 CPNE4Q96A23 557 aaPredicted RBP14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 OTUB1Q96FW1 271 aaPredicted RBP14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 KLHL15Q96M94 604 aa14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 OR7D2Q96RA2 312 aa14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 TACO1Q9BSH4 297 aaKnown RBP14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 RTN4RQ9BZR6 473 aa14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 C20orf27Q9GZN8 174 aa14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 PLEKHA6Q9Y2H5 1048 aa14.89□□□□□ -0.03
PDLIM2-217ENST00000491330 C17orf51A8MQB3 221 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 ADAMDEC1O15204 470 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 ZNF264O43296 627 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 CXCL13O43927 109 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 CYP7B1O75881 506 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 UBL4AP11441 157 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 UQCRC2P22695 453 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 S100A3P33764 101 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 KIR2DL2P43627 348 aaPredicted RBP14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 CCR4P51679 360 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 HBA1P69905 142 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 TXNL4AP83876 142 aaKnown RBP14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 FAM27E3Q08E93 113 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 TMEM44Q2T9K0 475 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 KLHL26Q53HC5 615 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 OR4F3Q6IEY1 312 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 VWA1Q6PCB0 445 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 PLXDC2Q6UX71 529 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 PAMR1Q6UXH9 720 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 BTLAQ7Z6A9 289 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 RFWD2Q8NHY2 731 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 ATP6V1G3Q96LB4 118 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 KLHL4Q9C0H6 718 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 NMUR2Q9GZQ4 415 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 OPN3Q9H1Y3 402 aaPredicted RBP14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 POLE3Q9NRF9 147 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 GPATCH2Q9NW75 528 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 CARD8Q9Y2G2 431 aa14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 SPIN1Q9Y657 262 aaPredicted RBP14.88□□□□□ -0.03
PDLIM2-217ENST00000491330 HMGB1P1B2RPK0 211 aaPredicted RBP14.87□□□□□ -0.03
PDLIM2-217ENST00000491330 H0YC42 278 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms