RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 ZNF682O95780 498 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 CRYABP02511 175 aaKnown RBP6.95□□□□□ -1.3
CLDN1-202ENST00000490800 CLPSP04118 112 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 SEMG1P04279 462 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 IFNA16P05015 189 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 BCHEP06276 602 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 CHRM4P08173 479 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 CYC1P08574 325 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 NR2F1P10589 423 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 ACP2P11117 423 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 SSTR4P31391 388 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 CD96P40200 585 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 MAP3K8P41279 467 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 GATA4P43694 442 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 PTDSS1P48651 473 aaKnown RBP6.95□□□□□ -1.3
CLDN1-202ENST00000490800 ANXA11P50995 505 aaKnown RBP6.95□□□□□ -1.3
CLDN1-202ENST00000490800 CLCN2P51788 898 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 PER3P56645 1201 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 PMP22Q01453 160 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 CHRNB3Q05901 458 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 FUT5Q11128 374 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 FUT7Q11130 342 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 ZNF267Q14586 743 aaPredicted RBP6.95□□□□□ -1.3
CLDN1-202ENST00000490800 SYPL1Q16563 259 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 DUSP5Q16690 384 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 MEP1AQ16819 746 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 FAM98BQ52LJ0 330 aaKnown RBP6.95□□□□□ -1.3
CLDN1-202ENST00000490800 CYBRD1Q53TN4 286 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 SFT2D3Q587I9 215 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 ZNF766Q5HY98 468 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 INTS11Q5TA45 600 aaKnown RBP6.95□□□□□ -1.3
CLDN1-202ENST00000490800 SP5Q6BEB4 398 aaPredicted RBP6.95□□□□□ -1.3
CLDN1-202ENST00000490800 SPINK14Q6IE38 97 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 HMBOX1Q6NT76 420 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 ZCCHC12Q6PEW1 402 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 PAPD4Q6PIY7 484 aaKnown RBP6.95□□□□□ -1.3
CLDN1-202ENST00000490800 GFRALQ6UXV0 394 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 LRRC74BQ6ZQY2 392 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 OLIG3Q7RTU3 272 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 PATL1Q86TB9 770 aaKnown RBP6.95□□□□□ -1.3
CLDN1-202ENST00000490800 SLC44A2Q8IWA5 706 aaPredicted RBP6.95□□□□□ -1.3
CLDN1-202ENST00000490800 BEST3Q8N1M1 668 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 METTL25Q8N6Q8 603 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 SLC16A11Q8NCK7 471 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 OR52R1Q8NGF1 315 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 OR10Q1Q8NGQ4 319 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 M1APQ8TC57 530 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 PTPMT1Q8WUK0 201 aaPredicted RBP6.95□□□□□ -1.3
CLDN1-202ENST00000490800 LRTOMTQ8WZ04 291 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 POP5Q969H6 163 aaKnown RBP6.95□□□□□ -1.3
CLDN1-202ENST00000490800 RELTQ969Z4 430 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 SLC47A1Q96FL8 570 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 SLC35A4Q96G79 324 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 PYURFQ96I23 114 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 RNF145Q96MT1 663 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 SIGLEC12Q96PQ1 595 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 SEPHS2Q99611 448 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 LPAR4Q99677 370 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 SSBP4Q9BWG4 385 aaPredicted RBP6.95□□□□□ -1.3
CLDN1-202ENST00000490800 CHID1Q9BWS9 393 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 UGT2B28Q9BY64 529 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 MAGIXQ9H6Y5 334 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 BCL2L10Q9HD36 194 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 PNO1Q9NRX1 252 aaKnown RBP6.95□□□□□ -1.3
CLDN1-202ENST00000490800 GIN1Q9NXP7 522 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 ANKRD10Q9NXR5 420 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 ABI3Q9P2A4 366 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 STOML1Q9UBI4 398 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 P2RX2Q9UBL9 471 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 SEC14L3Q9UDX4 400 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 RPS6KA6Q9UK32 745 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 SAMD4AQ9UPU9 718 aaKnown RBP6.95□□□□□ -1.3
CLDN1-202ENST00000490800 ERVK-19Q9WJR5 959 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 POLEQ07864 2286 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 CELSR2Q9HCU4 2923 aa6.95□□□□□ -1.3
CLDN1-202ENST00000490800 DOPEY1Q5JWR5 2465 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 NINQ8N4C6 2090 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 TRGV8A0A0C4DH27 118 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 TMEM247A6NEH6 219 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 DUXAA6NLW8 204 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 A8MUA0 341 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 C17orf105B2RV13 164 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 TPST1O60507 370 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 PGM3O95394 542 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 MT-ND1P03886 318 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 OPN1SWP03999 348 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 ALOX5P09917 674 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 RAP2AP10114 183 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 FCGR1AP12314 374 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 TNNI3P19429 210 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 CD247P20963 164 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 MAGEA2P43356 314 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 EMDP50402 254 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 SLC26A5P58743 744 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 ZNF155Q12901 538 aaPredicted RBP6.94□□□□□ -1.3
CLDN1-202ENST00000490800 TUBA3CQ13748 450 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 ELAVL1Q15717 326 aaKnown RBP6.94□□□□□ -1.3
CLDN1-202ENST00000490800 ATP6AP1Q15904 470 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 INAQ16352 499 aa6.94□□□□□ -1.3
CLDN1-202ENST00000490800 EXT1Q16394 746 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms