RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 DCUN1D3Q8IWE4 304 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 BCL6BQ8N143 479 aaPredicted RBP6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 MYO1HQ8N1T3 1032 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 PTGR2Q8N8N7 351 aaPredicted RBP6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 KCT2Q8NC54 265 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 RBM15BQ8NDT2 890 aaKnown RBP6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 OR4M2Q8NGB6 313 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 OR10G3Q8NGC4 313 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 CLDND2Q8NHS1 167 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 LINC01006Q8NI28 216 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 RP9Q8TA86 221 aaKnown RBP6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 ACTRT2Q8TDY3 377 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 ANKRD49Q8WVL7 239 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 ULK4Q96C45 1275 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 PPP1R36Q96LQ0 422 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 HBEGFQ99075 208 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 GPR21Q99679 349 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 CADM1Q9BY67 442 aaKnown RBP6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 SHCBP1LQ9BZQ2 653 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 RNPEPL1Q9HAU8 725 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 ANKHQ9HCJ1 492 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 CD274Q9NZQ7 290 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 ZNF69Q9UC07 566 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 OPN4Q9UHM6 478 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 POU2F3Q9UKI9 436 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 FIS1Q9Y3D6 152 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 NAALAD2Q9Y3Q0 740 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 PCDHB14Q9Y5E9 798 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 TNPO3Q9Y5L0 923 aaKnown RBP6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 KRTAP9-6A0A140TA67 174 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 E7ENX8 843 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 STX16-NPEPL1H3BU86 382 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 UBXN8O00124 270 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 STX16O14662 325 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 UBDO15205 165 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 NIPSNAP2O75323 286 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 SKAP2O75563 359 aaPredicted RBP6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 TFP02787 698 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 DDX5P17844 614 aaKnown RBP6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 EPHA3P29320 983 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 CMPK1P30085 196 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 ARRB2P32121 409 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 STARP49675 285 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 RAP1GDS1P52306 607 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 GFRA1P56159 465 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 SPOCK1Q08629 439 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 DBPQ10586 325 aaPredicted RBP6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 STX5Q13190 355 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 HERC3Q15034 1050 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 MPEG1Q2M385 716 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 MST1LQ2TV78 715 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 LSM12Q3MHD2 195 aaKnown RBP6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 PIGGQ5H8A4 983 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 C1orf146Q5VVC0 180 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 Q6ZSR9 355 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 VN1R4Q7Z5H5 301 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 SERPINA9Q86WD7 417 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 POU5F2Q8N7G0 328 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 FBXO15Q8NCQ5 510 aaPredicted RBP6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 OR6K3Q8NGY3 331 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 OR8K3Q8NH51 312 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 UTP4Q969X6 686 aaKnown RBP6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 LINGO1Q96FE5 620 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 ANKRD27Q96NW4 1050 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 PANX3Q96QZ0 392 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 OR52B2Q96RD2 323 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 ATOH8Q96SQ7 321 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 THTPAQ9BU02 230 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 HDHD5Q9BXW7 423 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 POTEKPQ9BYX7 375 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 GSTO2Q9H4Y5 243 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 WDR55Q9H6Y2 383 aaPredicted RBP6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 MEAF6Q9HAF1 191 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 MID1IP1Q9NPA3 183 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 TAS2R16Q9NYV7 291 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 NUDT4Q9NZJ9 180 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 STOML1Q9UBI4 398 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 PRPF19Q9UMS4 504 aaKnown RBP6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 DHRS7Q9Y394 339 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 TSC22D4Q9Y3Q8 395 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 TRAF6Q9Y4K3 522 aa6.52□□□□□ -1.37
EXOSC3-206ENST00000489414 IGLV3-16A0A075B6K0 115 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 NPEPPSL1A6NEC2 478 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 SDHDO14521 159 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 AZIN1O14977 448 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 OR1I1O60431 355 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 FKBP6O75344 327 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 GCM2O75603 506 aaPredicted RBP6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 CRYBA1P05813 215 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 FGF4P08620 206 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 OR56A5P0C7T3 313 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 DAOP14920 347 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 FUT4P22083 530 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 ACRV1P26436 265 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 PIK3R1P27986 724 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 PPP2R1BP30154 601 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 ARL1P40616 181 aaPredicted RBP6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 SLC37A1P57057 533 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 KRTAP10-11P60412 298 aa6.51□□□□□ -1.37
EXOSC3-206ENST00000489414 RNF4P78317 190 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms