RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 PRODHO43272 600 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 ZNF749O43361 778 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 KLF4O43474 513 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 BRINP1O60477 761 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 CPNE3O75131 537 aaKnown RBP7.85□□□□□ -1.15
VTI1A-207ENST00000489357 RGS9O75916 674 aaPredicted RBP7.85□□□□□ -1.15
VTI1A-207ENST00000489357 UBXN7O94888 489 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 NKX2-2O95096 273 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 NSA2O95478 260 aaKnown RBP7.85□□□□□ -1.15
VTI1A-207ENST00000489357 NADKO95544 446 aaPredicted RBP7.85□□□□□ -1.15
VTI1A-207ENST00000489357 CER1O95813 267 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 LCKP06239 509 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 C8orf89P0DMQ9 161 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 GAAP10253 952 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 DBTP11182 482 aaKnown RBP7.85□□□□□ -1.15
VTI1A-207ENST00000489357 RNH1P13489 461 aaKnown RBP7.85□□□□□ -1.15
VTI1A-207ENST00000489357 CSRP1P21291 193 aaKnown RBP7.85□□□□□ -1.15
VTI1A-207ENST00000489357 POU1F1P28069 291 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 SOX6P35712 828 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 LIPAP38571 399 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 CAPZBP47756 277 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 OMPP47874 163 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 ZNF91Q05481 1191 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 MLLT11Q13015 90 aaPredicted RBP7.85□□□□□ -1.15
VTI1A-207ENST00000489357 SPHARQ15513 63 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 ZNHIT3Q15649 155 aaPredicted RBP7.85□□□□□ -1.15
VTI1A-207ENST00000489357 DUSP5Q16690 384 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 RGS21Q2M5E4 152 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 ZNF404Q494X3 552 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 MINDY4Q4G0A6 757 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 ARMCX4Q5H9R4 360 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 DCST2Q5T1A1 773 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 ZNF613Q6PF04 617 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 C16orf87Q6PH81 154 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 FAM111BQ6SJ93 734 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 Q6ZNX1 250 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 Q6ZPB1 254 aaPredicted RBP7.85□□□□□ -1.15
VTI1A-207ENST00000489357 PLEKHM3Q6ZWE6 761 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 TRIM73Q86UV7 250 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 C17orf82Q86X59 251 aaPredicted RBP7.85□□□□□ -1.15
VTI1A-207ENST00000489357 RBM45Q8IUH3 476 aaKnown RBP7.85□□□□□ -1.15
VTI1A-207ENST00000489357 LACC1Q8IV20 430 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 SLC25A45Q8N413 288 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 OR6Q1Q8NGQ2 317 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 OR2I1PQ8NGU4 316 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 WDR36Q8NI36 951 aaKnown RBP7.85□□□□□ -1.15
VTI1A-207ENST00000489357 ZNF417Q8TAU3 575 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 ZCCHC10Q8TBK6 192 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 TMEM163Q8TC26 289 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 CHPT1Q8WUD6 406 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 FGF11Q92914 225 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 LRFN5Q96NI6 719 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 CCNL2Q96S94 520 aaPredicted RBP7.85□□□□□ -1.15
VTI1A-207ENST00000489357 ZNF587Q96SQ5 575 aaPredicted RBP7.85□□□□□ -1.15
VTI1A-207ENST00000489357 MGLLQ99685 303 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 COQ7Q99807 217 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 LMF2Q9BU23 707 aaKnown RBP7.85□□□□□ -1.15
VTI1A-207ENST00000489357 LRRC61Q9BV99 259 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 TAPBPLQ9BX59 468 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 DCSTAMPQ9H295 470 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 FN3KQ9H479 309 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 GAREM1Q9H706 876 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 FGF20Q9NP95 211 aaPredicted RBP7.85□□□□□ -1.15
VTI1A-207ENST00000489357 CHCHD3Q9NX63 227 aaKnown RBP7.85□□□□□ -1.15
VTI1A-207ENST00000489357 MAT2BQ9NZL9 334 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 BAIAP2Q9UQB8 552 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 UGT2A1Q9Y4X1 527 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 PCDHGA3Q9Y5H0 932 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 SNRNP200O75643 2136 aaKnown RBP7.85□□□□□ -1.15
VTI1A-207ENST00000489357 NCOR2Q9Y618 2525 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 LOC105369274A0A096LPK9 316 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 LOC102723532A0A0G2JNH3 316 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 FITM1A5D6W6 292 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 CDHR4A6H8M9 788 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 TLCD2A6NGC4 264 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 KDM4EB2RXH2 506 aaPredicted RBP7.84□□□□□ -1.15
VTI1A-207ENST00000489357 KPNA4O00629 521 aaPredicted RBP7.84□□□□□ -1.15
VTI1A-207ENST00000489357 EIF1AYO14602 144 aaKnown RBP7.84□□□□□ -1.15
VTI1A-207ENST00000489357 CTNSO60931 367 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 ENTPD6O75354 484 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 RAB36O95755 333 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 MSL3P1P0C860 447 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 ALPPL2P10696 532 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 ACP2P11117 423 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 HOXB4P17483 251 aaPredicted RBP7.84□□□□□ -1.15
VTI1A-207ENST00000489357 MYL12AP19105 171 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 CDH3P22223 829 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 GALP22466 123 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 PSMA1P25786 263 aaKnown RBP7.84□□□□□ -1.15
VTI1A-207ENST00000489357 LCN1P31025 176 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 RBM34P42696 430 aaKnown RBP7.84□□□□□ -1.15
VTI1A-207ENST00000489357 PDX1P52945 283 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 HSD17B7P56937 341 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 HNRNPKP61978 463 aaKnown RBP eCLIP7.84□□□□□ -1.15
VTI1A-207ENST00000489357 SNRPNP63162 240 aaKnown RBP7.84□□□□□ -1.15
VTI1A-207ENST00000489357 POU6F2P78424 691 aaPredicted RBP7.84□□□□□ -1.15
VTI1A-207ENST00000489357 SIM1P81133 766 aaPredicted RBP7.84□□□□□ -1.15
VTI1A-207ENST00000489357 ZNF45Q02386 682 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 KRR1Q13601 381 aaKnown RBP7.84□□□□□ -1.15
VTI1A-207ENST00000489357 SERTAD2Q14140 314 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms