RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 MED17Q9NVC6 651 aa12.19□□□□□ -0.46
LMO4-203ENST00000489303 KCNN3Q9UGI6 736 aa12.19□□□□□ -0.46
LMO4-203ENST00000489303 USH1CQ9Y6N9 552 aa12.19□□□□□ -0.46
LMO4-203ENST00000489303 NPIPA5A0A0B4J1W7 369 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 NPIPA7E9PJI5 369 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 POLR3GO15318 223 aaPredicted RBP12.18□□□□□ -0.46
LMO4-203ENST00000489303 TGDSO95455 350 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 NPIPA8P0DM63 369 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 OR12D1P0DN82 309 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 EIF1P41567 113 aaKnown RBP12.18□□□□□ -0.46
LMO4-203ENST00000489303 P2RX1P51575 399 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 AGFG1P52594 562 aaKnown RBP12.18□□□□□ -0.46
LMO4-203ENST00000489303 SUMO3P55854 103 aaPredicted RBP12.18□□□□□ -0.46
LMO4-203ENST00000489303 STX1BP61266 288 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 PHC1P78364 1004 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 GPR68Q15743 365 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 CD226Q15762 336 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 ARHGAP11BQ3KRB8 267 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 PDSS1Q5T2R2 415 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 SAXO2Q658L1 398 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 TNFAIP8L2Q6P589 184 aaPredicted RBP12.18□□□□□ -0.46
LMO4-203ENST00000489303 ZNF621Q6ZSS3 439 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 KIF18BQ86Y91 864 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 MIER2Q8N344 545 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 GTPBP8Q8N3Z3 284 aaPredicted RBP12.18□□□□□ -0.46
LMO4-203ENST00000489303 RELL2Q8NC24 303 aaPredicted RBP12.18□□□□□ -0.46
LMO4-203ENST00000489303 NEURL3Q96EH8 262 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 TEX37Q96LM6 180 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 SH3GL2Q99962 352 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 PINK1Q9BXM7 581 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 PRRG4Q9BZD6 226 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 NMUR2Q9GZQ4 415 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 PIGMQ9H3S5 423 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 RMND5AQ9H871 391 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 POLE3Q9NRF9 147 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 INTS9Q9NV88 658 aaKnown RBP12.18□□□□□ -0.46
LMO4-203ENST00000489303 PAQR5Q9NXK6 330 aaPredicted RBP12.18□□□□□ -0.46
LMO4-203ENST00000489303 ZIM2Q9NZV7 527 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 CLCF1Q9UBD9 225 aa12.18□□□□□ -0.46
LMO4-203ENST00000489303 FREM3P0C091 2139 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 C7orf72A4D263 438 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 CCDC154A6NI56 674 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 C9JVG2 144 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 RFXANKO14593 260 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 EIF1AYO14602 144 aaKnown RBP12.17□□□□□ -0.46
LMO4-203ENST00000489303 EIF4E2O60573 245 aaKnown RBP12.17□□□□□ -0.46
LMO4-203ENST00000489303 ANP32DO95626 131 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 KRT75O95678 551 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 CRHP06850 196 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 UBL4AP11441 157 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 FCGR2AP12318 317 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 H2AFXP16104 143 aaPredicted RBP12.17□□□□□ -0.46
LMO4-203ENST00000489303 IL12AP29459 219 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 KIR2DL3P43628 341 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 CPA2P48052 419 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 CASP9P55211 416 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 RAC1P63000 192 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 PPP2R2AP63151 447 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 ZNF117Q03924 483 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 TMEM44Q2T9K0 475 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 PLPPR5Q32ZL2 321 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 FBXL19-AS1Q494R0 122 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 PPP4R4Q6NUP7 873 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 EPGNQ6UW88 154 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 TMCO5AQ8N6Q1 288 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 TOR1AIP2Q8NFQ8 470 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 OIT3Q8WWZ8 545 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 MARK4Q96L34 752 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 OR52B2Q96RD2 323 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 SERHL2Q9H4I8 314 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 CARD8Q9Y2G2 431 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 ZNF175Q9Y473 711 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 WDR45Q9Y484 360 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 INTS1Q8N201 2190 aaKnown RBP12.17□□□□□ -0.46
LMO4-203ENST00000489303 MED13LQ71F56 2210 aa12.17□□□□□ -0.46
LMO4-203ENST00000489303 UQCRHLA0A096LP55 91 aa12.16□□□□□ -0.46
LMO4-203ENST00000489303 SERINC4A6NH21 518 aa12.16□□□□□ -0.46
LMO4-203ENST00000489303 GJE1A6NN92 205 aa12.16□□□□□ -0.46
LMO4-203ENST00000489303 SHISA8B8ZZ34 492 aa12.16□□□□□ -0.46
LMO4-203ENST00000489303 NPIPB9F8W1W9 429 aa12.16□□□□□ -0.46
LMO4-203ENST00000489303 ZNF264O43296 627 aa12.16□□□□□ -0.46
LMO4-203ENST00000489303 TGM6O95932 706 aa12.16□□□□□ -0.46
LMO4-203ENST00000489303 GUSBP08236 651 aa12.16□□□□□ -0.46
LMO4-203ENST00000489303 CAPN3P20807 821 aa12.16□□□□□ -0.46
LMO4-203ENST00000489303 EIF1AXP47813 144 aaKnown RBP12.16□□□□□ -0.46
LMO4-203ENST00000489303 CCR4P51679 360 aa12.16□□□□□ -0.46
LMO4-203ENST00000489303 POLR2JP52435 117 aaKnown RBP12.16□□□□□ -0.46
LMO4-203ENST00000489303 SUCLG1P53597 346 aaKnown RBP12.16□□□□□ -0.46
LMO4-203ENST00000489303 DLX5P56178 289 aa12.16□□□□□ -0.46
LMO4-203ENST00000489303 CLDN15P56746 228 aa12.16□□□□□ -0.46
LMO4-203ENST00000489303 CLDN20P56880 219 aa12.16□□□□□ -0.46
LMO4-203ENST00000489303 CBFBQ13951 182 aa12.16□□□□□ -0.46
LMO4-203ENST00000489303 FGFBP1Q14512 234 aa12.16□□□□□ -0.46
LMO4-203ENST00000489303 ZNF141Q15928 474 aa12.16□□□□□ -0.46
LMO4-203ENST00000489303 GPAT3Q53EU6 434 aa12.16□□□□□ -0.46
LMO4-203ENST00000489303 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.16□□□□□ -0.46
LMO4-203ENST00000489303 PDZK1Q5T2W1 519 aa12.16□□□□□ -0.46
LMO4-203ENST00000489303 HEPHL1Q6MZM0 1159 aa12.16□□□□□ -0.46
LMO4-203ENST00000489303 POMZP3Q6PJE2 187 aa12.16□□□□□ -0.46
LMO4-203ENST00000489303 MSANTD1Q6ZTZ1 278 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms