RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 GATSQ8NAP1 163 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 WDR60Q8WVS4 1066 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 ZG16BQ96DA0 208 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 GNRHR2Q96P88 292 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 BTBD10Q9BSF8 475 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 THTPAQ9BU02 230 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 QRSL1Q9H0R6 528 aaKnown RBP9.4□□□□□ -0.9
SKA1-204ENST00000488454 PTGES2Q9H7Z7 377 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 PROK2Q9HC23 129 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 AGPAT4Q9NRZ5 378 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 DEPPQ9NTK1 212 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 TUBA8Q9NY65 449 aaPredicted RBP9.4□□□□□ -0.9
SKA1-204ENST00000488454 SEC14L3Q9UDX4 400 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 PRPF19Q9UMS4 504 aaKnown RBP9.4□□□□□ -0.9
SKA1-204ENST00000488454 SLC35A3Q9Y2D2 325 aa9.4□□□□□ -0.9
SKA1-204ENST00000488454 GPC6Q9Y625 555 aaPredicted RBP9.4□□□□□ -0.9
SKA1-204ENST00000488454 A0A0G2JMM0 328 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 A0A1W2PPB8 328 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 A0A1W2PRS3 328 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 KIR3DP1A8MWS1 328 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 FAM47E-STBD1D6RA91 191 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 M0QX08 132 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 ZNF264O43296 627 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 HCRTR2O43614 444 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 EIF4E2O60573 245 aaKnown RBP9.39□□□□□ -0.91
SKA1-204ENST00000488454 TRIM3O75382 744 aaPredicted RBP9.39□□□□□ -0.91
SKA1-204ENST00000488454 TRAPPC6AO75865 159 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 STAMBPO95630 424 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 UBL4AP11441 157 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 NID1P14543 1247 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 ZNF24P17028 368 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 TCN1P20061 433 aaPredicted RBP9.39□□□□□ -0.91
SKA1-204ENST00000488454 HTR1EP28566 365 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 ADH7P40394 386 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 RFC3P40938 356 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 PTGDSP41222 190 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 GAS1P54826 345 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 TNP2Q05952 138 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 SLC10A1Q14973 349 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 MAPK14Q16539 360 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 COLEC12Q5KU26 742 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 SAMD5Q5TGI4 173 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 OR5M10Q6IEU7 315 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 HMGN2P46Q86SG4 172 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 VRK2Q86Y07 508 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 ZFP62Q8NB50 900 aaPredicted RBP9.39□□□□□ -0.91
SKA1-204ENST00000488454 BHLHE22Q8NFJ8 381 aaPredicted RBP9.39□□□□□ -0.91
SKA1-204ENST00000488454 B4GALNT2Q8NHY0 566 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 RNF138Q8WVD3 245 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 RASSF5Q8WWW0 418 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 FIG4Q92562 907 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 SH3YL1Q96HL8 342 aaPredicted RBP9.39□□□□□ -0.91
SKA1-204ENST00000488454 FRMD6Q96NE9 622 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 TTTY12Q9BZ98 90 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 DSN1Q9H410 356 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 KLHL28Q9NXS3 571 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 MED11Q9P086 117 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 KCNE5Q9UJ90 142 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 CARD8Q9Y2G2 431 aa9.39□□□□□ -0.91
SKA1-204ENST00000488454 USP24Q9UPU5 2620 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 CNTRLQ7Z7A1 2325 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 DSPPQ9NZW4 1301 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 PINLYPA6NC86 204 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 FAM166BA8MTA8 275 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 CXCR6O00574 342 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 TFECO14948 347 aaPredicted RBP9.38□□□□□ -0.91
SKA1-204ENST00000488454 GMFGO60234 142 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 DNAJC8O75937 253 aaPredicted RBP9.38□□□□□ -0.91
SKA1-204ENST00000488454 NUDT14O95848 222 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 PABPC4LP0CB38 370 aaKnown RBP9.38□□□□□ -0.91
SKA1-204ENST00000488454 UBTFL6P0CB48 400 aaPredicted RBP9.38□□□□□ -0.91
SKA1-204ENST00000488454 FAM157BP0CG42 384 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 HSD17B1P14061 328 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 UQCRBP14927 111 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 ME2P23368 584 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 GDF1P27539 372 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 PRKAR1BP31321 381 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 KDELR2P33947 212 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 GCKP35557 465 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 PMP22Q01453 160 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 FOXO1Q12778 655 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 FGFBP1Q14512 234 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 INPP5JQ15735 1006 aaPredicted RBP9.38□□□□□ -0.91
SKA1-204ENST00000488454 CD226Q15762 336 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 EIPR1Q53HC9 387 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 GLYATQ6IB77 296 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 CCDC80Q76M96 950 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 ZNF440Q8IYI8 595 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 FAM109AQ8N4B1 249 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 TMCO5AQ8N6Q1 288 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 WDSUB1Q8N9V3 476 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 Q8NA96 180 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 TOR1AIP2Q8NFQ8 470 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 LZICQ8WZA0 190 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 FAM162AQ96A26 154 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 MCUR1Q96AQ8 359 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 SLC7A6OSQ96CW6 309 aaPredicted RBP9.38□□□□□ -0.91
SKA1-204ENST00000488454 RTN4RQ9BZR6 473 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 LAT2Q9GZY6 243 aa9.38□□□□□ -0.91
SKA1-204ENST00000488454 ADPRHL2Q9NX46 363 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms