RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 NOXRED1Q6NXP6 359 aa17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 TIFABQ6ZNK6 161 aa17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 LCA5Q86VQ0 697 aa17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 MISPQ8IVT2 679 aa17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 B4GALNT2Q8NHY0 566 aa17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 CPNE4Q96A23 557 aaPredicted RBP17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 GIMAP5Q96F15 307 aa17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 EGLN2Q96KS0 407 aa17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 C16orf45Q96MC5 204 aaPredicted RBP17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 BARX1Q9HBU1 254 aaPredicted RBP17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 PDPK1O15530 556 aa17.26■□□□□ 0.35
SMPDL3A-202ENST00000487215 RSL1D1O76021 490 aaKnown RBP17.26■□□□□ 0.35
SMPDL3A-202ENST00000487215 CD8AP01732 235 aa17.26■□□□□ 0.35
SMPDL3A-202ENST00000487215 MANFP55145 182 aaKnown RBP17.26■□□□□ 0.35
SMPDL3A-202ENST00000487215 P2RY6Q15077 328 aa17.26■□□□□ 0.35
SMPDL3A-202ENST00000487215 DUSP5Q16690 384 aa17.26■□□□□ 0.35
SMPDL3A-202ENST00000487215 TRIM46Q7Z4K8 759 aa17.26■□□□□ 0.35
SMPDL3A-202ENST00000487215 SLC16A11Q8NCK7 471 aa17.26■□□□□ 0.35
SMPDL3A-202ENST00000487215 NUP43Q8NFH3 380 aa17.26■□□□□ 0.35
SMPDL3A-202ENST00000487215 OR6Y1Q8NGX8 325 aa17.26■□□□□ 0.35
SMPDL3A-202ENST00000487215 CEP70Q8NHQ1 597 aa17.26■□□□□ 0.35
SMPDL3A-202ENST00000487215 CIDECQ96AQ7 238 aaPredicted RBP17.26■□□□□ 0.35
SMPDL3A-202ENST00000487215 ALG2Q9H553 416 aa17.26■□□□□ 0.35
SMPDL3A-202ENST00000487215 TIGARQ9NQ88 270 aa17.26■□□□□ 0.35
SMPDL3A-202ENST00000487215 UBQLN4Q9NRR5 601 aa17.26■□□□□ 0.35
SMPDL3A-202ENST00000487215 ZNF814B7Z6K7 855 aa17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 SCDO00767 359 aa17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 PHF1O43189 567 aaPredicted RBP17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 EFNA2O43921 213 aa17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 GPRIN2O60269 458 aa17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 FESP07332 822 aa17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 HPGDP15428 266 aa17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 ELK4P28324 431 aa17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 GCAP28676 217 aa17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 EIF1P41567 113 aaKnown RBP17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 ITGADQ13349 1161 aa17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 ZNF385BQ569K4 471 aa17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 FCRLAQ7L513 359 aa17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 SZRD1Q7Z422 152 aa17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 DTX2Q86UW9 622 aa17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 TDRPQ86YL5 185 aa17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 CCNYL1Q8N7R7 359 aa17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 OTUB1Q96FW1 271 aaPredicted RBP17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 MS4A4EQ96PG1 132 aa17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 USB1Q9BQ65 265 aaKnown RBP17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 GRIP2Q9C0E4 1043 aa17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 GP6Q9HCN6 339 aa17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 CISD1Q9NZ45 108 aaKnown RBP17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 NTMQ9P121 344 aa17.25■□□□□ 0.35
SMPDL3A-202ENST00000487215 IGHV4-30-2A0A087WSY4 118 aa17.24■□□□□ 0.35
SMPDL3A-202ENST00000487215 A0A096LNT2 108 aa17.24■□□□□ 0.35
SMPDL3A-202ENST00000487215 EXOC1LA0A1B0GW35 172 aa17.24■□□□□ 0.35
SMPDL3A-202ENST00000487215 A0A1W2PQD3 144 aa17.24■□□□□ 0.35
SMPDL3A-202ENST00000487215 SSX4O60224 188 aa17.24■□□□□ 0.35
SMPDL3A-202ENST00000487215 RAMP1O60894 148 aa17.24■□□□□ 0.35
SMPDL3A-202ENST00000487215 PRKD3O94806 890 aa17.24■□□□□ 0.35
SMPDL3A-202ENST00000487215 YES1P07947 543 aa17.24■□□□□ 0.35
SMPDL3A-202ENST00000487215 FAM157CP0CG43 387 aa17.24■□□□□ 0.35
SMPDL3A-202ENST00000487215 ECHS1P30084 290 aa17.24■□□□□ 0.35
SMPDL3A-202ENST00000487215 LCN1P31025 176 aa17.24■□□□□ 0.35
SMPDL3A-202ENST00000487215 KIAA0040Q15053 153 aa17.24■□□□□ 0.35
SMPDL3A-202ENST00000487215 C6orf52Q5T4I8 152 aa17.24■□□□□ 0.35
SMPDL3A-202ENST00000487215 CCNJQ5T5M9 372 aa17.24■□□□□ 0.35
SMPDL3A-202ENST00000487215 BHLHA15Q7RTS1 189 aaPredicted RBP17.24■□□□□ 0.35
SMPDL3A-202ENST00000487215 C16orf58Q96GQ5 468 aa17.24■□□□□ 0.35
SMPDL3A-202ENST00000487215 COQ10BQ9H8M1 238 aa17.24■□□□□ 0.35
SMPDL3A-202ENST00000487215 RRAGDQ9NQL2 400 aaPredicted RBP17.24■□□□□ 0.35
SMPDL3A-202ENST00000487215 CCL27Q9Y4X3 112 aa17.24■□□□□ 0.35
SMPDL3A-202ENST00000487215 SHISA9B4DS77 424 aa17.23■□□□□ 0.35
SMPDL3A-202ENST00000487215 ABHD2P08910 425 aa17.23■□□□□ 0.35
SMPDL3A-202ENST00000487215 PTNP21246 168 aa17.23■□□□□ 0.35
SMPDL3A-202ENST00000487215 C21orf58P58505 322 aa17.23■□□□□ 0.35
SMPDL3A-202ENST00000487215 ZNF117Q03924 483 aa17.23■□□□□ 0.35
SMPDL3A-202ENST00000487215 STK11Q15831 433 aa17.23■□□□□ 0.35
SMPDL3A-202ENST00000487215 COX18Q8N8Q8 333 aa17.23■□□□□ 0.35
SMPDL3A-202ENST00000487215 NOA1Q8NC60 698 aaKnown RBP17.23■□□□□ 0.35
SMPDL3A-202ENST00000487215 ZFP28Q8NHY6 868 aa17.23■□□□□ 0.35
SMPDL3A-202ENST00000487215 FBXO27Q8NI29 283 aa17.23■□□□□ 0.35
SMPDL3A-202ENST00000487215 ZNF764Q96H86 408 aaPredicted RBP17.23■□□□□ 0.35
SMPDL3A-202ENST00000487215 RHNO1Q9BSD3 238 aa17.23■□□□□ 0.35
SMPDL3A-202ENST00000487215 TNFRSF12AQ9NP84 129 aa17.23■□□□□ 0.35
SMPDL3A-202ENST00000487215 FAIMQ9NVQ4 179 aa17.23■□□□□ 0.35
SMPDL3A-202ENST00000487215 B3GALT5Q9Y2C3 310 aa17.23■□□□□ 0.35
SMPDL3A-202ENST00000487215 GJE1A6NN92 205 aa17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 GOLGA8RI6L899 631 aa17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 ZNF195O14628 629 aa17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 OIP5O43482 229 aa17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 CRCPO75575 148 aa17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 LYZL6O75951 148 aa17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 F12P00748 615 aaPredicted RBP17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 ALOX5P09917 674 aa17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 ENPP1P22413 925 aa17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 SERPINB4P48594 390 aa17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 CDH11P55287 796 aa17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 PPA1Q15181 289 aa17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 NRF1Q16656 503 aa17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 TMEM176BQ3YBM2 270 aaPredicted RBP17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 EXOSC6Q5RKV6 272 aaKnown RBP17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 CBLN3Q6UW01 205 aa17.22■□□□□ 0.35
SMPDL3A-202ENST00000487215 Q6ZT83 130 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms