RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 PSD2Q9BQI7 771 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 RBM4Q9BWF3 364 aaKnown RBP6.74□□□□□ -1.33
PDPN-205ENST00000487038 RTN4RQ9BZR6 473 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 BPESC1Q9GZL8 116 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 BCO1Q9HAY6 547 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 MED17Q9NVC6 651 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 PRSS50Q9UI38 385 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 FBXO9Q9UK97 447 aaPredicted RBP6.74□□□□□ -1.33
PDPN-205ENST00000487038 TMCO1Q9UM00 188 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 ATP23Q9Y6H3 246 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 ARFGEF3Q5TH69 2177 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 WNK1Q9H4A3 2382 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 TCRBV9S1A1TA0A576 114 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 TMEM89A2RUT3 159 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 SERINC4A6NH21 518 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 CXorf49A8MYA2 514 aaPredicted RBP6.73□□□□□ -1.33
PDPN-205ENST00000487038 SCDO00767 359 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 RGS14O43566 566 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 PCDH7O60245 1069 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 PIAS1O75925 651 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 SEC31AO94979 1220 aaKnown RBP6.73□□□□□ -1.33
PDPN-205ENST00000487038 VENTXO95231 258 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 OXSR1O95747 527 aaPredicted RBP6.73□□□□□ -1.33
PDPN-205ENST00000487038 PDYNP01213 254 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 ERCC1P07992 297 aaPredicted RBP6.73□□□□□ -1.33
PDPN-205ENST00000487038 NGFRP08138 427 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 COL6A2P12110 1019 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 HSD3B1P14060 373 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 IGHV1-2P23083 117 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 HSD3B2P26439 372 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 IVDP26440 423 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 APEX1P27695 318 aaKnown RBP6.73□□□□□ -1.33
PDPN-205ENST00000487038 CDC25BP30305 580 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 SLC7A1P30825 629 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 SSTR1P30872 391 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 NTSP30990 170 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 LIMS1P48059 325 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 NCBP2P52298 156 aaKnown RBP eCLIP6.73□□□□□ -1.33
PDPN-205ENST00000487038 MANFP55145 182 aaKnown RBP6.73□□□□□ -1.33
PDPN-205ENST00000487038 DEFA6Q01524 100 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 DR1Q01658 176 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 CHRNEQ04844 493 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 MLC1Q15049 377 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 VPS26BQ4G0F5 336 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 SPIN4Q56A73 249 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 SGO1Q5FBB7 561 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 OR7E24Q6IFN5 339 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 SHQ1Q6PI26 577 aaKnown RBP6.73□□□□□ -1.33
PDPN-205ENST00000487038 TMEM107Q6UX40 140 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 DEF8Q6ZN54 512 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 SLC46A3Q7Z3Q1 461 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 UBE2J2Q8N2K1 259 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 MMGT1Q8N4V1 131 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 TEX29Q8N6K0 151 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 OR4F6Q8NGB9 312 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 FAM216AQ8WUB2 273 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 FBXO17Q96EF6 278 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 SORCS2Q96PQ0 1159 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 LMF2Q9BU23 707 aaKnown RBP6.73□□□□□ -1.33
PDPN-205ENST00000487038 SRXN1Q9BYN0 137 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 SAP130Q9H0E3 1048 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 METTL17Q9H7H0 456 aaPredicted RBP6.73□□□□□ -1.33
PDPN-205ENST00000487038 ZNF696Q9H7X3 374 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 MIEF1Q9NQG6 463 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 SLC35C2Q9NQQ7 365 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 EMC3Q9P0I2 261 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 NTMQ9P121 344 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 VPS29Q9UBQ0 182 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 GRID1Q9ULK0 1009 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 C19orf53Q9UNZ5 99 aaPredicted RBP6.73□□□□□ -1.33
PDPN-205ENST00000487038 PCDHB14Q9Y5E9 798 aa6.73□□□□□ -1.33
PDPN-205ENST00000487038 FAM159BA6NKW6 160 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 CCT8L1PA6NM43 557 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 ZNF724A8MTY0 619 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 STX16-NPEPL1H3BU86 382 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 STX16O14662 325 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 KLHL2O95198 593 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 PSMG1O95456 288 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 NUDT14O95848 222 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 OTCP00480 354 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 JUNP05412 331 aaKnown RBP6.72□□□□□ -1.33
PDPN-205ENST00000487038 GSTA2P09210 222 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 ENPP1P22413 925 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 DVL1P1P54792 670 aaPredicted RBP6.72□□□□□ -1.33
PDPN-205ENST00000487038 RAC3P60763 192 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 RASGEF1BQ0VAM2 473 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 FOXF1Q12946 379 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 TRAF3Q13114 568 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 SELENBP1Q13228 472 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 NAB1Q13506 487 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 PDCD2Q16342 344 aaPredicted RBP6.72□□□□□ -1.33
PDPN-205ENST00000487038 C1QTNF12Q5T7M4 302 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 APOOLQ6UXV4 268 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 CYS1Q717R9 158 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 GALNT5Q7Z7M9 940 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 GLCCI1Q86VQ1 547 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 CENPLQ8N0S6 344 aaPredicted RBP6.72□□□□□ -1.33
PDPN-205ENST00000487038 OR2L13Q8N349 312 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 ZNF433Q8N7K0 673 aaPredicted RBP6.72□□□□□ -1.33
PDPN-205ENST00000487038 PTGR2Q8N8N7 351 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms