RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 GAAP10253 952 aa16.67■□□□□ 0.26
PDLIM7-207ENST00000486828 ATP6V1E1P36543 226 aa16.67■□□□□ 0.26
PDLIM7-207ENST00000486828 CARTPTQ16568 116 aa16.67■□□□□ 0.26
PDLIM7-207ENST00000486828 ZNF791Q3KP31 576 aaPredicted RBP16.67■□□□□ 0.26
PDLIM7-207ENST00000486828 DDI2Q5TDH0 399 aa16.67■□□□□ 0.26
PDLIM7-207ENST00000486828 FAM131AQ6UXB0 335 aa16.67■□□□□ 0.26
PDLIM7-207ENST00000486828 SIRT6Q8N6T7 355 aa16.67■□□□□ 0.26
PDLIM7-207ENST00000486828 ARIH2OSQ8N7S6 290 aa16.67■□□□□ 0.26
PDLIM7-207ENST00000486828 IL17RDQ8NFM7 739 aa16.67■□□□□ 0.26
PDLIM7-207ENST00000486828 HMGB4Q8WW32 186 aa16.67■□□□□ 0.26
PDLIM7-207ENST00000486828 SPRYD4Q8WW59 207 aaPredicted RBP16.67■□□□□ 0.26
PDLIM7-207ENST00000486828 NECTIN4Q96NY8 510 aa16.67■□□□□ 0.26
PDLIM7-207ENST00000486828 CCDC3Q9BQI4 270 aa16.67■□□□□ 0.26
PDLIM7-207ENST00000486828 STARD5Q9NSY2 213 aa16.67■□□□□ 0.26
PDLIM7-207ENST00000486828 C20orf141Q9NUB4 165 aa16.67■□□□□ 0.26
PDLIM7-207ENST00000486828 USP36Q9P275 1121 aaKnown RBP16.67■□□□□ 0.26
PDLIM7-207ENST00000486828 FBXL21Q9UKT6 434 aa16.67■□□□□ 0.26
PDLIM7-207ENST00000486828 FAM183AA6NL82 134 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 SGK494L7N484 410 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 NKX2-2O95096 273 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 IL7P13232 177 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 FUT1P19526 365 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 TBXA2RP21731 343 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 AZGP1P25311 298 aaKnown RBP16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 CASP3P42574 277 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 RNF144AP50876 292 aaPredicted RBP16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 PPP1CAP62136 330 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 EIF2B5Q13144 721 aaKnown RBP16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 RPL13AP3Q6NVV1 102 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 NIPAL3Q6P499 406 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 PLBD1Q6P4A8 553 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 XKRXQ6PP77 449 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 ZNF322Q6U7Q0 402 aaPredicted RBP16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 TMPRSS11FQ6ZWK6 438 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 SPATC1Q76KD6 591 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 OOSP2Q86WS3 158 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 HOXB13Q92826 284 aaPredicted RBP16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 EVA1AQ9H8M9 152 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 ATP13A2Q9NQ11 1180 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 C14orf105Q9NVL8 296 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 TMEM5Q9Y2B1 443 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 OR5K3A6NET4 321 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 CBX7O95931 251 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 HLA-DPB1P04440 258 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 SLC35E2P0CK97 266 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 BMP7P18075 431 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 PLAURQ03405 335 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 ZNF542PQ5EBM4 170 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 ARMC4Q5T2S8 1044 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 GARNL3Q5VVW2 1013 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 MEPCEQ7L2J0 689 aaKnown RBP16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 TAF8Q7Z7C8 310 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 CDK20Q8IZL9 346 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 LNX2Q8N448 690 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 OR51G2Q8NGK0 314 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 DIRAS2Q96HU8 199 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 ZNF559Q9BR84 538 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 TIGARQ9NQ88 270 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 ASB6Q9NWX5 421 aa16.66■□□□□ 0.26
PDLIM7-207ENST00000486828 SCN2AQ99250 2005 aa16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 CASKO14936 926 aa16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 HCRTR1O43613 425 aa16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 DYRK3O43781 588 aa16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 RDH16O75452 317 aa16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 RCBTB2O95199 551 aa16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 CELP19835 753 aa16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 DRD5P21918 477 aa16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 FZD5Q13467 585 aa16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 AMZ1Q400G9 498 aa16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 ZNF613Q6PF04 617 aa16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 NRARPQ7Z6K4 114 aa16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 LSRQ86X29 649 aaPredicted RBP16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 ZNF761Q86XN6 746 aaPredicted RBP16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 VWA5B2Q8N398 1253 aa16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 OR52R1Q8NGF1 315 aa16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 HLA-CQ95604 372 aa16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 OTULINQ96BN8 352 aa16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 BPIFA2Q96DR5 249 aa16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 DCLRE1CQ96SD1 692 aaKnown RBP16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 TMED9Q9BVK6 235 aa16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 ENKD1Q9H0I2 346 aa16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 TBC1D17Q9HA65 648 aa16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 MED31Q9Y3C7 131 aa16.65■□□□□ 0.26
PDLIM7-207ENST00000486828 SPTY2D1-AS1A0A0U1RR47 76 aa16.64■□□□□ 0.26
PDLIM7-207ENST00000486828 A0A1W2PQ09 198 aa16.64■□□□□ 0.26
PDLIM7-207ENST00000486828 SMIM30A4D0T7 59 aa16.64■□□□□ 0.26
PDLIM7-207ENST00000486828 FABP12A6NFH5 140 aa16.64■□□□□ 0.26
PDLIM7-207ENST00000486828 GABRPO00591 440 aa16.64■□□□□ 0.26
PDLIM7-207ENST00000486828 PAICSP22234 425 aaKnown RBP16.64■□□□□ 0.26
PDLIM7-207ENST00000486828 CCR5P51681 352 aa16.64■□□□□ 0.26
PDLIM7-207ENST00000486828 BDH1Q02338 343 aa16.64■□□□□ 0.26
PDLIM7-207ENST00000486828 KIAA0895LQ68EN5 471 aa16.64■□□□□ 0.26
PDLIM7-207ENST00000486828 DGAT2L6Q6ZPD8 337 aa16.64■□□□□ 0.26
PDLIM7-207ENST00000486828 ZNF438Q7Z4V0 828 aa16.64■□□□□ 0.26
PDLIM7-207ENST00000486828 ZAR1Q86SH2 424 aa16.64■□□□□ 0.26
PDLIM7-207ENST00000486828 MARCH9Q86YJ5 346 aa16.64■□□□□ 0.26
PDLIM7-207ENST00000486828 CAMKK1Q8N5S9 505 aa16.64■□□□□ 0.26
PDLIM7-207ENST00000486828 GDPD1Q8N9F7 314 aa16.64■□□□□ 0.26
PDLIM7-207ENST00000486828 DNAJA4Q8WW22 397 aaPredicted RBP16.64■□□□□ 0.26
PDLIM7-207ENST00000486828 KIAA1143Q96AT1 154 aaPredicted RBP16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms