RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 C1orf216Q8TAB5 229 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 ALG8Q9BVK2 526 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 PLCL2Q9UPR0 1127 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 PCDHGA3Q9Y5H0 932 aa12.34□□□□□ -0.43
HMGN1-216ENST00000486741 PRAMEF2O60811 474 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 MRPL19P49406 292 aaKnown RBP12.33□□□□□ -0.44
HMGN1-216ENST00000486741 CTXN1P60606 82 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 SYT6Q5T7P8 510 aaPredicted RBP12.33□□□□□ -0.44
HMGN1-216ENST00000486741 LRRC17Q8N6Y2 441 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 CNOT9Q92600 299 aaKnown RBP12.33□□□□□ -0.44
HMGN1-216ENST00000486741 MMP17Q9ULZ9 603 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 CORINQ9Y5Q5 1042 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 SCN2AQ99250 2005 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 TRBV2A0A0J9YWF9 115 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 GABRG2P18507 467 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 TSPAN31Q12999 210 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 PGGHGQ32M88 737 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 HDDC2Q7Z4H3 204 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 GDF7Q7Z4P5 450 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 GPAT4Q86UL3 456 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 SLC22A4Q9H015 551 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 ARID1AO14497 2285 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 ZC3H12DA2A288 527 aaKnown RBP12.33□□□□□ -0.44
HMGN1-216ENST00000486741 SLC22A31A6NKX4 558 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 CTSVO60911 334 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 NCR1O76036 304 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 AHSA1O95433 338 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 DHFRP00374 187 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 CELA2BP08218 269 aaPredicted RBP12.33□□□□□ -0.44
HMGN1-216ENST00000486741 PSMB10P40306 273 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 MNDAP41218 407 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 DBPQ10586 325 aaPredicted RBP12.33□□□□□ -0.44
HMGN1-216ENST00000486741 LEG1Q6P5S2 330 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 PLXDC1Q8IUK5 500 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 SDR16C5Q8N3Y7 309 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 OR51Q1Q8NH59 317 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 COX14Q96I36 57 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 TNFRSF13CQ96RJ3 184 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 ZNF559Q9BR84 538 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 SP140LQ9H930 580 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 CDH10Q9Y6N8 788 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 NCOR1O75376 2440 aa12.33□□□□□ -0.44
HMGN1-216ENST00000486741 CXorf51AA0A1B0GTR3 108 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 FAM221BA6H8Z2 402 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 K7EQS6 105 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 GABARAPO95166 117 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 LGI1O95970 557 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 AK1P00568 194 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 TRIM23P36406 574 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 PPP1CAP62136 330 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 GAS6Q14393 721 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 MTFR2Q6P444 385 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 PLEKHG7Q6ZR37 379 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 TMEM163Q8TC26 289 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 NSMAFQ92636 917 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 DAZLQ92904 295 aaKnown RBP12.32□□□□□ -0.44
HMGN1-216ENST00000486741 COMMD4Q9H0A8 199 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 TMEM185BQ9H7F4 350 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 METTL7AQ9H8H3 244 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 PRDM7Q9NQW5 492 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 ZNF226Q9NYT6 803 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 LAMP5Q9UJQ1 280 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 OR2A25A4D2G3 310 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 H0YC42 278 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 SLC2A10O95528 541 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 CLEC2LP0C7M8 214 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 JUNBP17275 347 aaPredicted RBP12.32□□□□□ -0.44
HMGN1-216ENST00000486741 PSMA3P25788 255 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 OC90Q02509 493 aaPredicted RBP12.32□□□□□ -0.44
HMGN1-216ENST00000486741 ZP2Q05996 745 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 TDGQ13569 410 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 ELOAQ14241 798 aaKnown RBP12.32□□□□□ -0.44
HMGN1-216ENST00000486741 MPEG1Q2M385 716 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 SLC46A3Q7Z3Q1 461 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 Q8N402 240 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 CHST4Q8NCG5 386 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 CNOT2Q9NZN8 540 aaKnown RBP12.32□□□□□ -0.44
HMGN1-216ENST00000486741 YARS2Q9Y2Z4 477 aaKnown RBP12.32□□□□□ -0.44
HMGN1-216ENST00000486741 PCDHGB1Q9Y5G3 927 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 TDRD6O60522 2096 aaKnown RBP12.32□□□□□ -0.44
HMGN1-216ENST00000486741 TRAV6A0A075B6T7 132 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 TVP23AA6NH52 213 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 CPNE6O95741 557 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 SPARCP09486 303 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 ATF4P18848 351 aaPredicted RBP12.32□□□□□ -0.44
HMGN1-216ENST00000486741 F8A1P23610 371 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 RORAP35398 523 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 MAGEA2P43356 314 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 BTG2P78543 158 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 SRSF5Q13243 272 aaKnown RBP12.32□□□□□ -0.44
HMGN1-216ENST00000486741 PDE7AQ13946 482 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 GBX1Q14549 363 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 FAHD1Q6P587 224 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 UBE2Q1Q7Z7E8 422 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 ZNF582Q96NG8 517 aaPredicted RBP12.32□□□□□ -0.44
HMGN1-216ENST00000486741 PIGUQ9H490 435 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 FAIMQ9NVQ4 179 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 RABL2BQ9UNT1 228 aa12.32□□□□□ -0.44
HMGN1-216ENST00000486741 HTR3EA5X5Y0 456 aa12.31□□□□□ -0.44
HMGN1-216ENST00000486741 AGAP5A6NIR3 686 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms