RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 CCT8L1PA6NM43 557 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 SUPT3HB4E1H0 165 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 FOXE1O00358 373 aaPredicted RBP13.2□□□□□ -0.3
U2AF1-211ENST00000486519 RGS14O43566 566 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 SUPT3HO75486 399 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 S100BP04271 92 aaPredicted RBP13.2□□□□□ -0.3
U2AF1-211ENST00000486519 ITGA5P08648 1049 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 ME2P23368 584 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 SERPINF1P36955 418 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 ELK3P41970 407 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 PHEXP78562 749 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 SLC18A2Q05940 514 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 GALNT1Q10472 559 aaPredicted RBP13.2□□□□□ -0.3
U2AF1-211ENST00000486519 SCGB2A2Q13296 93 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 ADIPOQQ15848 244 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 PRSS53Q2L4Q9 553 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 ERCC6LQ2NKX8 1250 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 C9orf135Q5VTT2 229 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 LIPJQ5W064 366 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 PPIL6Q8IXY8 311 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 ZNF786Q8N393 782 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 ATP6V1C2Q8NEY4 427 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 ATOH8Q96SQ7 321 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 SERPINI1Q99574 410 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 PLK3Q9H4B4 646 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 POPDC3Q9HBV1 291 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 PFDN4Q9NQP4 134 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 G6PC2Q9NQR9 355 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 TREM2Q9NZC2 230 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 ZDHHC2Q9UIJ5 367 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 UTS2RQ9UKP6 389 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 GRIP1Q9Y3R0 1128 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 WNK2Q9Y3S1 2297 aa13.2□□□□□ -0.3
U2AF1-211ENST00000486519 A0A087WZY1 265 aa13.19□□□□□ -0.3
U2AF1-211ENST00000486519 BCAS2O75934 225 aaPredicted RBP13.19□□□□□ -0.3
U2AF1-211ENST00000486519 PDE5AO76074 875 aa13.19□□□□□ -0.3
U2AF1-211ENST00000486519 LINGO3P0C6S8 592 aa13.19□□□□□ -0.3
U2AF1-211ENST00000486519 MTHFD2P13995 350 aa13.19□□□□□ -0.3
U2AF1-211ENST00000486519 MDKP21741 143 aaPredicted RBP13.19□□□□□ -0.3
U2AF1-211ENST00000486519 CXCR5P32302 372 aa13.19□□□□□ -0.3
U2AF1-211ENST00000486519 PRIM2P49643 509 aa13.19□□□□□ -0.3
U2AF1-211ENST00000486519 IDH3GP51553 393 aaPredicted RBP13.19□□□□□ -0.3
U2AF1-211ENST00000486519 RAB10P61026 200 aa13.19□□□□□ -0.3
U2AF1-211ENST00000486519 TMEM176BQ3YBM2 270 aaPredicted RBP13.19□□□□□ -0.3
U2AF1-211ENST00000486519 STEAP4Q687X5 459 aa13.19□□□□□ -0.3
U2AF1-211ENST00000486519 VHLLQ6RSH7 139 aa13.19□□□□□ -0.3
U2AF1-211ENST00000486519 ZAR1Q86SH2 424 aa13.19□□□□□ -0.3
U2AF1-211ENST00000486519 RELL1Q8IUW5 271 aa13.19□□□□□ -0.3
U2AF1-211ENST00000486519 ZNF100Q8IYN0 542 aa13.19□□□□□ -0.3
U2AF1-211ENST00000486519 METTL4Q8N3J2 472 aa13.19□□□□□ -0.3
U2AF1-211ENST00000486519 OR4C3Q8NH37 302 aa13.19□□□□□ -0.3
U2AF1-211ENST00000486519 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.19□□□□□ -0.3
U2AF1-211ENST00000486519 RNF217Q8TC41 542 aa13.19□□□□□ -0.3
U2AF1-211ENST00000486519 MUS81Q96NY9 551 aa13.19□□□□□ -0.3
U2AF1-211ENST00000486519 TMPRSS13Q9BYE2 586 aa13.19□□□□□ -0.3
U2AF1-211ENST00000486519 DDX28Q9NUL7 540 aaKnown RBP13.19□□□□□ -0.3
U2AF1-211ENST00000486519 NUDT4Q9NZJ9 180 aa13.19□□□□□ -0.3
U2AF1-211ENST00000486519 ADAM29Q9UKF5 820 aa13.19□□□□□ -0.3
U2AF1-211ENST00000486519 ICAM5Q9UMF0 924 aa13.19□□□□□ -0.3
U2AF1-211ENST00000486519 ZNF780BQ9Y6R6 833 aa13.19□□□□□ -0.3
U2AF1-211ENST00000486519 OIP5O43482 229 aa13.18□□□□□ -0.3
U2AF1-211ENST00000486519 PNPP00491 289 aa13.18□□□□□ -0.3
U2AF1-211ENST00000486519 OR4A8P0C604 315 aa13.18□□□□□ -0.3
U2AF1-211ENST00000486519 PPOXP50336 477 aa13.18□□□□□ -0.3
U2AF1-211ENST00000486519 RNF144AP50876 292 aaPredicted RBP13.18□□□□□ -0.3
U2AF1-211ENST00000486519 RASGEF1BQ0VAM2 473 aa13.18□□□□□ -0.3
U2AF1-211ENST00000486519 CYP27C1Q4G0S4 372 aa13.18□□□□□ -0.3
U2AF1-211ENST00000486519 SSX8Q7RTT4 187 aa13.18□□□□□ -0.3
U2AF1-211ENST00000486519 C1QL2Q7Z5L3 287 aa13.18□□□□□ -0.3
U2AF1-211ENST00000486519 ISCA2Q86U28 154 aa13.18□□□□□ -0.3
U2AF1-211ENST00000486519 UBE2J2Q8N2K1 259 aa13.18□□□□□ -0.3
U2AF1-211ENST00000486519 TOR1AIP2Q8NFQ8 470 aa13.18□□□□□ -0.3
U2AF1-211ENST00000486519 TRIM58Q8NG06 486 aa13.18□□□□□ -0.3
U2AF1-211ENST00000486519 OR52E4Q8NGH9 312 aa13.18□□□□□ -0.3
U2AF1-211ENST00000486519 EXOSC8Q96B26 276 aaKnown RBP13.18□□□□□ -0.3
U2AF1-211ENST00000486519 LRRC58Q96CX6 371 aa13.18□□□□□ -0.3
U2AF1-211ENST00000486519 MRGPRX4Q96LA9 322 aa13.18□□□□□ -0.3
U2AF1-211ENST00000486519 UBXN10Q96LJ8 280 aa13.18□□□□□ -0.3
U2AF1-211ENST00000486519 RACGAP1Q9H0H5 632 aa13.18□□□□□ -0.3
U2AF1-211ENST00000486519 RHOJQ9H4E5 214 aa13.18□□□□□ -0.3
U2AF1-211ENST00000486519 CA10Q9NS85 328 aa13.18□□□□□ -0.3
U2AF1-211ENST00000486519 FARSBQ9NSD9 589 aaKnown RBP13.18□□□□□ -0.3
U2AF1-211ENST00000486519 KLHL9Q9P2J3 617 aa13.18□□□□□ -0.3
U2AF1-211ENST00000486519 DNAJC9-AS1A6NH13 148 aa13.17□□□□□ -0.3
U2AF1-211ENST00000486519 PLOD3O60568 738 aa13.17□□□□□ -0.3
U2AF1-211ENST00000486519 CYTIPO60759 359 aa13.17□□□□□ -0.3
U2AF1-211ENST00000486519 OXSR1O95747 527 aaPredicted RBP13.17□□□□□ -0.3
U2AF1-211ENST00000486519 PRB2P02812 416 aaPredicted RBP13.17□□□□□ -0.3
U2AF1-211ENST00000486519 GAAP10253 952 aa13.17□□□□□ -0.3
U2AF1-211ENST00000486519 CLK3P49761 638 aaKnown RBP13.17□□□□□ -0.3
U2AF1-211ENST00000486519 ZNF41P51814 821 aaPredicted RBP13.17□□□□□ -0.3
U2AF1-211ENST00000486519 ATP6V0D1P61421 351 aa13.17□□□□□ -0.3
U2AF1-211ENST00000486519 TRADDQ15628 312 aa13.17□□□□□ -0.3
U2AF1-211ENST00000486519 CD226Q15762 336 aa13.17□□□□□ -0.3
U2AF1-211ENST00000486519 DECR1Q16698 335 aa13.17□□□□□ -0.3
U2AF1-211ENST00000486519 FBXW9Q5XUX1 488 aa13.17□□□□□ -0.3
U2AF1-211ENST00000486519 Q6ZPA2 131 aa13.17□□□□□ -0.3
U2AF1-211ENST00000486519 GOLGA7Q7Z5G4 137 aa13.17□□□□□ -0.3
U2AF1-211ENST00000486519 TMEM139Q8IV31 216 aa13.17□□□□□ -0.3
U2AF1-211ENST00000486519 BPIFB2Q8N4F0 458 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms