RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 SHISA8B8ZZ34 492 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 FXYD1O00168 92 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 AIM2O14862 343 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 ZNF264O43296 627 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 ZIC3O60481 467 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 SHOX2O60902 331 aaPredicted RBP10.74□□□□□ -0.69
HPS4-214ENST00000485842 GUSBP08236 651 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 UBTFL6P0CB48 400 aaPredicted RBP10.74□□□□□ -0.69
HPS4-214ENST00000485842 ARAFP10398 606 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 ESRRAP11474 423 aaPredicted RBP10.74□□□□□ -0.69
HPS4-214ENST00000485842 BMP2P12643 396 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 IL7RP16871 459 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 BMP7P18075 431 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 GPX2P18283 190 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 MSX1P28360 303 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 P2RX1P51575 399 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 CRYZQ08257 329 aaKnown RBP10.74□□□□□ -0.69
HPS4-214ENST00000485842 FGFBP1Q14512 234 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 GXYLT1Q4G148 440 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 RABL3Q5HYI8 236 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 EMC4Q5J8M3 183 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 NCCRP1Q6ZVX7 275 aaPredicted RBP10.74□□□□□ -0.69
HPS4-214ENST00000485842 EIF3MQ7L2H7 374 aaKnown RBP10.74□□□□□ -0.69
HPS4-214ENST00000485842 DOLPP1Q86YN1 238 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 FAM26EQ8N5C1 309 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 BBS10Q8TAM1 723 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 LRRC58Q96CX6 371 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 TREX2Q9BQ50 279 aaPredicted RBP10.74□□□□□ -0.69
HPS4-214ENST00000485842 TP63Q9H3D4 680 aaPredicted RBP10.74□□□□□ -0.69
HPS4-214ENST00000485842 MTHFD2LQ9H903 347 aaPredicted RBP10.74□□□□□ -0.69
HPS4-214ENST00000485842 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.74□□□□□ -0.69
HPS4-214ENST00000485842 GID8Q9NWU2 228 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 SUCOQ9UBS9 1254 aaKnown RBP10.74□□□□□ -0.69
HPS4-214ENST00000485842 ERRFI1Q9UJM3 462 aaPredicted RBP10.74□□□□□ -0.69
HPS4-214ENST00000485842 CAMK2AQ9UQM7 478 aa10.74□□□□□ -0.69
HPS4-214ENST00000485842 A0A0G2JPF8 293 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 FIGNL2A6NMB9 653 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 HNRNPCL2B2RXH8 293 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 HNRNPCL3B7ZW38 293 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 EIF4E2O60573 245 aaKnown RBP10.73□□□□□ -0.69
HPS4-214ENST00000485842 HNRNPCL1O60812 293 aaKnown RBP10.73□□□□□ -0.69
HPS4-214ENST00000485842 BCAS1O75363 584 aaPredicted RBP10.73□□□□□ -0.69
HPS4-214ENST00000485842 DCTN3O75935 186 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 FAM107AO95990 144 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 ACTL6AO96019 429 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 DBIP07108 87 aaKnown RBP10.73□□□□□ -0.69
HPS4-214ENST00000485842 HNRNPCL4P0DMR1 293 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 RPS4Y1P22090 263 aaKnown RBP10.73□□□□□ -0.69
HPS4-214ENST00000485842 STARP49675 285 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 GFRA1P56159 465 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 PER3P56645 1201 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 CDK6Q00534 326 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 SRYQ05066 204 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 SRSF1Q07955 248 aaKnown RBP eCLIP10.73□□□□□ -0.69
HPS4-214ENST00000485842 SKP2Q13309 424 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 SCARB2Q14108 478 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 GKAP1Q5VSY0 366 aaPredicted RBP10.73□□□□□ -0.69
HPS4-214ENST00000485842 VASNQ6EMK4 673 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 NANOGP8Q6NSW7 305 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 REEP3Q6NUK4 255 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 AAGABQ6PD74 315 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 ZNF836Q6ZNA1 936 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 VRK2Q86Y07 508 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 PEX5LQ8IYB4 626 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 TOR1AIP2Q8NFQ8 470 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 OR52P1PQ8NH57 321 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 OR10A6Q8NH74 314 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 OIT3Q8WWZ8 545 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 SMPDL3BQ92485 455 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 RELTQ969Z4 430 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 TIMP4Q99727 224 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 LAT2Q9GZY6 243 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 PIF1Q9H611 641 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 NANOGQ9H9S0 305 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 MED17Q9NVC6 651 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 ICAM5Q9UMF0 924 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 ANGPT4Q9Y264 503 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 SLC35A3Q9Y2D2 325 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 MRPS18CQ9Y3D5 142 aaKnown RBP10.73□□□□□ -0.69
HPS4-214ENST00000485842 GMEB1Q9Y692 573 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 DSPPQ9NZW4 1301 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 TENM4Q6N022 2769 aa10.73□□□□□ -0.69
HPS4-214ENST00000485842 MYO7BQ6PIF6 2116 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 A0A087WZY1 265 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 OR2M5A3KFT3 312 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 H3BML4 177 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 PGM3O95394 542 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 NID1P14543 1247 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 POU3F2P20265 443 aaPredicted RBP10.72□□□□□ -0.69
HPS4-214ENST00000485842 SLC6A2P23975 617 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 AQP1P29972 269 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 RYKP34925 604 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 PGM1P36871 562 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 ADH7P40394 386 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 CPA2P48052 419 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 NUDT2P50583 147 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 SUMO3P55854 103 aaPredicted RBP10.72□□□□□ -0.69
HPS4-214ENST00000485842 B3GALT5-AS1P59052 145 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 KCNJ10P78508 379 aa10.72□□□□□ -0.69
HPS4-214ENST00000485842 FOXF1Q12946 379 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms