RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 RIPPLY1Q0D2K3 151 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 C2orf80Q0P641 193 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 STX4Q12846 297 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 BNIP3Q12983 259 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 DNASE1L3Q13609 305 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 GANABQ14697 944 aaKnown RBP8.64□□□□□ -1.03
USP16-206ENST00000485067 GRK1Q15835 563 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 ZNF630Q2M218 657 aaPredicted RBP8.64□□□□□ -1.03
USP16-206ENST00000485067 C2orf76Q3KRA6 126 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 IFI44LQ53G44 452 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 HSD17B12Q53GQ0 312 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 SLC22A25Q6T423 547 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 C6orf15Q6UXA7 325 aaPredicted RBP8.64□□□□□ -1.03
USP16-206ENST00000485067 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.64□□□□□ -1.03
USP16-206ENST00000485067 PLA2G15Q8NCC3 412 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 OR9A2Q8NGT5 310 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 CD300LFQ8TDQ1 290 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 ARRDC3Q96B67 414 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 C14orf144Q96I85 54 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 HRASLS5Q96KN8 279 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 RHOVQ96L33 236 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 NRTNQ99748 197 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 MAPKAP1Q9BPZ7 522 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 TCEAL7Q9BRU2 100 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 SLC35A5Q9BS91 424 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 TUBG2Q9NRH3 451 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 PLSCR3Q9NRY6 295 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 THSD1Q9NS62 852 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 TMEM184CQ9NVA4 438 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 CLEC5AQ9NY25 188 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 TAS2R9Q9NYW1 312 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 PPP4R1LQ9P1A2 415 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 DEC1Q9P2X7 70 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 SLC9A8Q9Y2E8 581 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 RNF215Q9Y6U7 377 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 PRUNE2Q8WUY3 3088 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 METTL21EPA6NDL7 271 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 POM121BA6NF01 834 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 C5orf67F2Z3F1 127 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 CAPN5O15484 640 aaPredicted RBP8.64□□□□□ -1.03
USP16-206ENST00000485067 TBX1O43435 398 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 XPNPEP2O43895 674 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 SH3BGRLO75368 114 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 EIF3GO75821 320 aaKnown RBP eCLIP8.64□□□□□ -1.03
USP16-206ENST00000485067 DIRAS1O95057 198 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 GABARAPO95166 117 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 GUSBP08236 651 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 CYP4B1P13584 511 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 EFNA1P20827 205 aaPredicted RBP8.64□□□□□ -1.03
USP16-206ENST00000485067 CD40LGP29965 261 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 MVDP53602 400 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 CRYBA2P53672 197 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 REEP5Q00765 189 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 MAP4K2Q12851 820 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 CAMK2GQ13555 558 aaPredicted RBP8.64□□□□□ -1.03
USP16-206ENST00000485067 GPR176Q14439 515 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 PLA1AQ53H76 456 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 ZNF385BQ569K4 471 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 CRB2Q5IJ48 1285 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 PRAMEF14Q5SWL7 426 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 SYT6Q5T7P8 510 aaPredicted RBP8.64□□□□□ -1.03
USP16-206ENST00000485067 ARHGAP40Q5TG30 622 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 PRAMEF13Q5VWM6 474 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 MTFR2Q6P444 385 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 TMIGD1Q6UXZ0 262 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 CREB3L2Q70SY1 520 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 RRM2BQ7LG56 351 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 PRSS48Q7RTY5 328 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 LHFPL4Q7Z7J7 247 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 GALNT10Q86SR1 603 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 PDZD3Q86UT5 571 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 ZNF547Q8IVP9 402 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 RNF113BQ8IZP6 322 aaKnown RBP8.64□□□□□ -1.03
USP16-206ENST00000485067 DNAJC5GQ8N7S2 189 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 WDSUB1Q8N9V3 476 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 OR13C2Q8NGS9 318 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 ELP5Q8TE02 316 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 FOXRED1Q96CU9 486 aaPredicted RBP8.64□□□□□ -1.03
USP16-206ENST00000485067 BOD1Q96IK1 185 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 CSF3RQ99062 836 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 CDCA3Q99618 268 aaPredicted RBP8.64□□□□□ -1.03
USP16-206ENST00000485067 HDAC8Q9BY41 377 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 SEMA4CQ9C0C4 833 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 TTYH1Q9H313 450 aaPredicted RBP8.64□□□□□ -1.03
USP16-206ENST00000485067 SEMA6CQ9H3T2 930 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 TEX10Q9NXF1 929 aaPredicted RBP8.64□□□□□ -1.03
USP16-206ENST00000485067 EPHA6Q9UF33 1036 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 ICKQ9UPZ9 632 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 NCKAP1Q9Y2A7 1128 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 YBX2Q9Y2T7 364 aaKnown RBP8.64□□□□□ -1.03
USP16-206ENST00000485067 PCYT1BQ9Y5K3 369 aaPredicted RBP8.64□□□□□ -1.03
USP16-206ENST00000485067 CLCA3PQ9Y6N3 262 aa8.64□□□□□ -1.03
USP16-206ENST00000485067 C1QTNF3-AMACRE9PGA6 284 aa8.63□□□□□ -1.03
USP16-206ENST00000485067 RFXAPO00287 272 aa8.63□□□□□ -1.03
USP16-206ENST00000485067 TNFRSF11BO00300 401 aa8.63□□□□□ -1.03
USP16-206ENST00000485067 UBE2CO00762 179 aa8.63□□□□□ -1.03
USP16-206ENST00000485067 SIGLEC6O43699 453 aa8.63□□□□□ -1.03
USP16-206ENST00000485067 FAM20BO75063 409 aa8.63□□□□□ -1.03
USP16-206ENST00000485067 CPNE3O75131 537 aaKnown RBP8.63□□□□□ -1.03
USP16-206ENST00000485067 UBXN7O94888 489 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms