RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 FCMRO60667 390 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 RCBTB2O95199 551 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 PGRP06401 933 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 H2AFXP16104 143 aaPredicted RBP11.06□□□□□ -0.64
MSH5-216ENST00000484309 IL11P20809 199 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 OPRM1P35372 400 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 KHKP50053 298 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 CCR4P51679 360 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 ATP12AP54707 1039 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 SIRPAP78324 504 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 FUT5Q11128 374 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 FOXF1Q12946 379 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 TOMM34Q15785 309 aaPredicted RBP11.06□□□□□ -0.64
MSH5-216ENST00000484309 BCL2A1Q16548 175 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 TMEM44Q2T9K0 475 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 GLYR1Q49A26 553 aaPredicted RBP11.06□□□□□ -0.64
MSH5-216ENST00000484309 PDCD4Q53EL6 469 aaKnown RBP11.06□□□□□ -0.64
MSH5-216ENST00000484309 KLHL26Q53HC5 615 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 SAXO2Q658L1 398 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 GGNQ86UU5 652 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 RNF130Q86XS8 419 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 MISPQ8IVT2 679 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 CNEP1R1Q8N9A8 125 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 ZNF527Q8NB42 609 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 CHDHQ8NE62 594 aaPredicted RBP11.06□□□□□ -0.64
MSH5-216ENST00000484309 OR9I1Q8NGQ6 314 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 FNDC9Q8TBE3 224 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 PNPT1Q8TCS8 783 aaKnown RBP11.06□□□□□ -0.64
MSH5-216ENST00000484309 ACTRT2Q8TDY3 377 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 DYDC1Q8WWB3 177 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 XAGE5Q8WWM1 108 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 RNASE6Q93091 150 aaKnown RBP11.06□□□□□ -0.64
MSH5-216ENST00000484309 NEURL3Q96EH8 262 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 C14orf79Q96F83 325 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 CCDC115Q96NT0 180 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 PANX1Q96RD7 426 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 HOXD1Q9GZZ0 328 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 BTNL2Q9UIR0 455 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 KCNE5Q9UJ90 142 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 DTNAQ9Y4J8 743 aa11.06□□□□□ -0.64
MSH5-216ENST00000484309 A0A087WZY1 265 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 CCDC154A6NI56 674 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 DUXAA6NLW8 204 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 H3BNH8 94 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 LINC01387J3KSC0 135 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 SYT5O00445 386 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 UBDO15205 165 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 STX11O75558 287 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 SLC22A3O75751 556 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 CYP7B1O75881 506 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 IDO1P14902 403 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 ZNF17P17021 662 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 EIF1AXP47813 144 aaKnown RBP11.05□□□□□ -0.64
MSH5-216ENST00000484309 CPA2P48052 419 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 RPS3AP61247 264 aaKnown RBP11.05□□□□□ -0.64
MSH5-216ENST00000484309 PON3Q15166 354 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 SGCBQ16585 318 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 ARHGAP11BQ3KRB8 267 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 TIGD2Q4W5G0 525 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 FREM1Q5H8C1 2179 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 VWA1Q6PCB0 445 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 ZNF621Q6ZSS3 439 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 MTERF4Q7Z6M4 381 aaKnown RBP11.05□□□□□ -0.64
MSH5-216ENST00000484309 TMEM200AQ86VY9 491 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 LSRQ86X29 649 aaPredicted RBP11.05□□□□□ -0.64
MSH5-216ENST00000484309 GTPBP8Q8N3Z3 284 aaPredicted RBP11.05□□□□□ -0.64
MSH5-216ENST00000484309 GOT1L1Q8NHS2 421 aaPredicted RBP11.05□□□□□ -0.64
MSH5-216ENST00000484309 MIPOL1Q8TD10 442 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 ZBTB8AQ96BR9 441 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 ZNF524Q96C55 264 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 C7orf26Q96N11 449 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 UCN2Q96RP3 112 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 EBF4Q9BQW3 602 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 SFXN3Q9BWM7 321 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 MCCC2Q9HCC0 563 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 SLC6A13Q9NSD5 602 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 EXD2Q9NVH0 621 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 ICAM5Q9UMF0 924 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 AP4B1Q9Y6B7 739 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 SPG11Q96JI7 2443 aa11.05□□□□□ -0.64
MSH5-216ENST00000484309 CCDC168Q8NDH2 2452 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 A0A1W2PNV4 684 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 PRAMEF27A3QJZ7 478 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 SERINC4A6NH21 518 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 TNFSF11O14788 317 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 CXCL13O43927 109 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 UGT2B17O75795 530 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 TNFSF13O75888 250 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 SMNDC1O75940 238 aaKnown RBP eCLIP11.04□□□□□ -0.644e-11■■□□□ 11.9
MSH5-216ENST00000484309 SASH3O75995 380 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 SOX30O94993 753 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 IL18BPO95998 194 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 AK1P00568 194 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 LINGO3P0C6S8 592 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 UBL4AP11441 157 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 PSMA4P25789 261 aaKnown RBP11.04□□□□□ -0.64
MSH5-216ENST00000484309 SHC1P29353 583 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 SFTPDP35247 375 aa11.04□□□□□ -0.64
MSH5-216ENST00000484309 CPOXP36551 454 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms