RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 TFPTP0C1Z6 253 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 UBL4AP11441 157 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 ZNF708P17019 499 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 PSMA4P25789 261 aaKnown RBP14.38□□□□□ -0.11
UPF3A-208ENST00000484246 P2RX1P51575 399 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 DLX5P56178 289 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 CLDN18P56856 261 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 CHRNEQ04844 493 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 KLF10Q13118 480 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 SKP2Q13309 424 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 GNA13Q14344 377 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 MAPRE2Q15555 327 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 MAPK14Q16539 360 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 SYPL1Q16563 259 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 GPAT3Q53EU6 434 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 RAET1LQ5VY80 246 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 ZNF585AQ6P3V2 769 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 ARSKQ6UWY0 536 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 C3P1Q6ZMU1 363 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 ADGRE4PQ86SQ3 457 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 RETREG3Q86VR2 466 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 METTL25Q8N6Q8 603 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 ZPLD1Q8TCW7 415 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 UCN2Q96RP3 112 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 TTYH2Q9BSA4 534 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 LAT2Q9GZY6 243 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 RUBCNLQ9H714 662 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 BCL2L10Q9HD36 194 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 EXOSC3Q9NQT5 275 aaKnown RBP14.38□□□□□ -0.11
UPF3A-208ENST00000484246 SLAMF8Q9P0V8 285 aa14.38□□□□□ -0.11
UPF3A-208ENST00000484246 OR2M5A3KFT3 312 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 CD8B2A6NJW9 211 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 BBIP1A8MTZ0 92 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 ZNF264O43296 627 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 OIP5O43482 229 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 NTN1O95631 604 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 LINGO3P0C6S8 592 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 GLI4P10075 376 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 NR2F1P10589 423 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 PEPDP12955 493 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 GPX2P18283 190 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 ELK4P28324 431 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 ADH6P28332 368 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 PGM1P36871 562 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 CRATP43155 626 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 CRISP3P54108 245 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 PLAURQ03405 335 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 ART3Q13508 389 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 SLC25A53Q5H9E4 307 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 RIPPLY2Q5TAB7 128 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 CBLN3Q6UW01 205 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 EIF3MQ7L2H7 374 aaKnown RBP14.37□□□□□ -0.11
UPF3A-208ENST00000484246 OLIG3Q7RTU3 272 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 SPATA21Q7Z572 469 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 MRGPRGQ86SM5 289 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 DHDDSQ86SQ9 333 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 ZGRF1Q86YA3 2104 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 LACC1Q8IV20 430 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 RPRMLQ8N4K4 120 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 OR5W2Q8NH69 310 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 SLC38A5Q8WUX1 472 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 NSRP1Q9H0G5 558 aaKnown RBP14.37□□□□□ -0.11
UPF3A-208ENST00000484246 MTHFD2LQ9H903 347 aaPredicted RBP14.37□□□□□ -0.11
UPF3A-208ENST00000484246 CARD8Q9Y2G2 431 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 RPH3AQ9Y2J0 694 aaPredicted RBP14.37□□□□□ -0.11
UPF3A-208ENST00000484246 KLF2Q9Y5W3 355 aaPredicted RBP14.37□□□□□ -0.11
UPF3A-208ENST00000484246 AP4B1Q9Y6B7 739 aa14.37□□□□□ -0.11
UPF3A-208ENST00000484246 EPPINO95925 133 aa14.36□□□□□ -0.11
UPF3A-208ENST00000484246 ARAFP10398 606 aa14.36□□□□□ -0.11
UPF3A-208ENST00000484246 DRD4P21917 467 aa14.36□□□□□ -0.11
UPF3A-208ENST00000484246 EIF1P41567 113 aaKnown RBP14.36□□□□□ -0.11
UPF3A-208ENST00000484246 ZNF41P51814 821 aaPredicted RBP14.36□□□□□ -0.11
UPF3A-208ENST00000484246 NUP107P57740 925 aa14.36□□□□□ -0.11
UPF3A-208ENST00000484246 RUNDC3AQ59EK9 446 aa14.36□□□□□ -0.11
UPF3A-208ENST00000484246 NSUN5P2Q63ZY6 315 aa14.36□□□□□ -0.11
UPF3A-208ENST00000484246 SEM1Q6ZVN7 128 aa14.36□□□□□ -0.11
UPF3A-208ENST00000484246 ZNF614Q8N883 585 aa14.36□□□□□ -0.11
UPF3A-208ENST00000484246 RND1Q92730 232 aa14.36□□□□□ -0.11
UPF3A-208ENST00000484246 TMEM19Q96HH6 336 aa14.36□□□□□ -0.11
UPF3A-208ENST00000484246 SH3YL1Q96HL8 342 aaPredicted RBP14.36□□□□□ -0.11
UPF3A-208ENST00000484246 ANKRD27Q96NW4 1050 aa14.36□□□□□ -0.11
UPF3A-208ENST00000484246 CGREF1Q99674 301 aa14.36□□□□□ -0.11
UPF3A-208ENST00000484246 TREX2Q9BQ50 279 aaPredicted RBP14.36□□□□□ -0.11
UPF3A-208ENST00000484246 KLHDC3Q9BQ90 382 aa14.36□□□□□ -0.11
UPF3A-208ENST00000484246 IKZF5Q9H5V7 419 aa14.36□□□□□ -0.11
UPF3A-208ENST00000484246 TMEM38AQ9H6F2 299 aa14.36□□□□□ -0.11
UPF3A-208ENST00000484246 CALHM2Q9HA72 323 aa14.36□□□□□ -0.11
UPF3A-208ENST00000484246 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.36□□□□□ -0.11
UPF3A-208ENST00000484246 PRDM4Q9UKN5 801 aa14.36□□□□□ -0.11
UPF3A-208ENST00000484246 GPC6Q9Y625 555 aaPredicted RBP14.36□□□□□ -0.11
UPF3A-208ENST00000484246 CAPN7Q9Y6W3 813 aa14.36□□□□□ -0.11
UPF3A-208ENST00000484246 EML6Q6ZMW3 1958 aa14.36□□□□□ -0.11
UPF3A-208ENST00000484246 MBD3L4A6NDZ8 208 aaPredicted RBP14.35□□□□□ -0.11
UPF3A-208ENST00000484246 MBD3L3A6NE82 208 aaPredicted RBP14.35□□□□□ -0.11
UPF3A-208ENST00000484246 TMEM247A6NEH6 219 aa14.35□□□□□ -0.11
UPF3A-208ENST00000484246 MBD3L5A6NJ08 208 aaPredicted RBP14.35□□□□□ -0.11
UPF3A-208ENST00000484246 GTPBP1O00178 669 aaKnown RBP14.35□□□□□ -0.11
UPF3A-208ENST00000484246 FBP2O00757 339 aa14.35□□□□□ -0.11
UPF3A-208ENST00000484246 SNX3O60493 162 aa14.35□□□□□ -0.11
UPF3A-208ENST00000484246 CCDC22O60826 627 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms